| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Namu_3414 |
|---|
| Symbol | |
|---|
| ID | 8449029 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nakamurella multipartita DSM 44233 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013235 |
|---|
| Strand | + |
|---|
| Start bp | 3752909 |
|---|
| End bp | 3753700 |
|---|
| Gene Length | 792 bp |
|---|
| Protein Length | 263 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 645042491 |
|---|
| Product | membrane protein-like protein |
|---|
| Protein accession | YP_003202731 |
|---|
| Protein GI | 258653575 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3305] Predicted membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.00178043 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
|---|
| Fosmid unclonability p-value | 0.000103691 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | GTGGACTGGA GCCTGCGCAC CTGCGGCCGT CGGGGGCACG AGACCTTCGC GCCGGACGAG
CCGGACCTGC GGGCCCGGCT GACCGCGCCG ACCCCGGCCG GGACCGCCTG GCGCTGCCTG
CGCTGTGGGG ACTTCGTCGT CGGCGCGCCC CGGCGGTCGG GGCCGGCCGG CCAGGCCCCG
GAGGTGCCGC GCGGCCGGCT GCTGCGGGAC CGGGTGATCA TGCGGCTGCT GGCCGCCGAG
CGGGTCGCCC GGGCCCTGCT GATCGTGCTG GTCGGGGTGC TCGCCCTGCA CCTGCGCGAC
TCGCGCGCCG AACTGCGACG AGCCTTCGAC AACGAGCTCA CCCTGCTGCG CCCGGTCGCC
GACCAGCTCG GCTGGGACAT CGAGGGCTCG GAGCTGACCC GCGGCATCAA CCGCATCCTG
GGCCTGTCCG GCACGACGAT CAACTGGGTG GCAGTCGCCC TGTTCGCCTA CGCCGTGCTG
CTGCTGATCG AGTCCTACGG CCTGTGGCGG ATCCGGCGCT GGGGCGAGTA CTTCTCGGTC
GTGGTCACCA GCGTGTTCCT GCCGCTGGAG ATCTGGGAGC TGACCGAGAA GTTCACCTGG
TTCAAGGTCG TGCTGACCGC CGTGAACGTC GCCGCCGTGG CCTGGCTGGT CTGGTCCAAG
CGCCTGTTCG GCGTCCGCGG CGGTGACGCC GCCTACCGGG CCGAGCACAG CGAGGAGAGC
CTGCTCACGG TCGAGCGAGC GGCCCTGACC ACGGCCGCGG GGGCCGGCGC ACCGCCGGCC
CCGGCGCCGT GA
|
|---|
| Protein sequence | MDWSLRTCGR RGHETFAPDE PDLRARLTAP TPAGTAWRCL RCGDFVVGAP RRSGPAGQAP
EVPRGRLLRD RVIMRLLAAE RVARALLIVL VGVLALHLRD SRAELRRAFD NELTLLRPVA
DQLGWDIEGS ELTRGINRIL GLSGTTINWV AVALFAYAVL LLIESYGLWR IRRWGEYFSV
VVTSVFLPLE IWELTEKFTW FKVVLTAVNV AAVAWLVWSK RLFGVRGGDA AYRAEHSEES
LLTVERAALT TAAGAGAPPA PAP
|
|---|
| |