| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Namu_3398 |
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| Symbol | |
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| ID | 8449013 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nakamurella multipartita DSM 44233 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013235 |
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| Strand | - |
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| Start bp | 3736307 |
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| End bp | 3737074 |
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| Gene Length | 768 bp |
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| Protein Length | 255 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 645042475 |
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| Product | protein of unknown function DUF28 |
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| Protein accession | YP_003202715 |
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| Protein GI | 258653559 |
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| COG category | [S] Function unknown |
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| COG ID | [COG0217] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR01033] DNA-binding regulatory protein, YebC/PmpR family |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.00438869 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.000000218577 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGAGTGGCC ACTCCAAATG GGCGACGACC AAGCACCAGA AGGCGGCCAA GGACGCCAAG
CGGGGCAAGC TGTTCGCCAA GCTGATCAAG AACATCGAGG TCGCGGCCCG CACCGGGGGC
GGTGACCCGG ACGGCAACCC CACCCTCTAC GACGCGATCC AGAAGGCCAA GAAGTCCTCG
GTCCCCAACG AGAACATCGA CCGTGCGCTC AAGCGGGGGT CCGGGGCCGA GGCCGGCGGG
GTCGACTACC AGTCGATCAC CTACGAGGGC TACGGCCCCA ACGGCGTCGC GATCATGATC
GAGTGCCTGA CCGACAACCG GAACCGGGCC GCCTCCGAGG TGCGGGTGGC GGTCACCCGC
AACGGCGGCA CCATGGCCGA CCCGGGCAGC GTCTCGTACC TGTTCAGCCG CAAGGGCGTC
GTGCTGGTGC CGCAGCAGTC CAACGGCTCG ACCGTCACCG AGGACGATTT GATGCTGGCC
GTCCTGGACG CCGGGGCGGA GGAGATCAAC GACCTGGGCG AGACGTTCGA GGTCGTCTCC
GAGGCCACCG ACCTGGTCGC CGTGCGGACC GCGGTGACCG AGGCCGGGCT GGAGTACGAC
TCGGCCGACG CCACCTTCAT CGCCTCGGTC GACGTGCCCC TGGACGTGGA GGGCGCCCGC
AAGGTGATCA AGCTGGTGGA CGCGATCGAG GACCTGGACG ACGTGCAGAA CGTCTACACC
AATGCGGACA TCTCCGACGA GATCGCCGAG CAGCTCGACA ACGAGTAG
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| Protein sequence | MSGHSKWATT KHQKAAKDAK RGKLFAKLIK NIEVAARTGG GDPDGNPTLY DAIQKAKKSS
VPNENIDRAL KRGSGAEAGG VDYQSITYEG YGPNGVAIMI ECLTDNRNRA ASEVRVAVTR
NGGTMADPGS VSYLFSRKGV VLVPQQSNGS TVTEDDLMLA VLDAGAEEIN DLGETFEVVS
EATDLVAVRT AVTEAGLEYD SADATFIASV DVPLDVEGAR KVIKLVDAIE DLDDVQNVYT
NADISDEIAE QLDNE
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