Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Namu_3318 |
Symbol | |
ID | 8448933 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nakamurella multipartita DSM 44233 |
Kingdom | Bacteria |
Replicon accession | NC_013235 |
Strand | - |
Start bp | 3647635 |
End bp | 3648393 |
Gene Length | 759 bp |
Protein Length | 252 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 645042396 |
Product | transcriptional regulator, GntR family |
Protein accession | YP_003202636 |
Protein GI | 258653480 |
COG category | [K] Transcription |
COG ID | [COG2188] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.000065866 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.00380995 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGACCGTCT CACCTGTCGC CGAGCCGGTC GGTTCGTTGG ACCGCAGCGG ATCGACGCCC CTGTACATCC AATTGGCCAA CGTGCTGCGC GAAAGGATCG AGCGCGGTGA ATGGAAGCCG GATCAGAAGA TCCCCTCCGA GAACGAACTC AACCGGATGT ACGGGATCAG CCGGATGACC GCCCGCCAGG TGCTCGCGCA ACTGGTGAAC GAGGAACTGC TGTTCCGGGT GCAGGGCAAG GGCACCTTCG TGGCTCACCG CAAGATCGGC ACCCGGTCGC CGGCCTACAT GGGCATCCGG GAACAGCTCG AGCGCATGGG ATACGAGACC ACCACCAAGG TGCTCTCCAG CGAGGTCATC CCGGCCGACG TGAGAGTGGC CGAGCACCTG CGGATCTCAC CGGGCAGCCT GGTGTACCGG CTCAGTCGGG TCCGGTTGGT GGAGGACGAG CCGATCAGCC TGCATACGTC TTTCGTGCCC AAGGCGCTGG CCCAGGATCT GGATGCCGAC GATCTGGTCA ATCGCCAGTT GTGCGTCGTC CTGGAGAACG AGCACGGGTT GCGAATGAGC CGGGTGAACG AAAGCCTGGA GTCGACCCTG CCGTCGGCCG ACGAGGCCAA GCTGCTGCGC ATCCGGCGGA CGACGCCGTT GTTGTTGCTG CGCCAGGAGA TCTCGGACCC CACGGGACAG GAGTTCGAGT ACTCCCGAAT CCTGTTCCGT GGGGACAAGA TCAGACTGGA ATTCCAGTAC GAGCTGTAG
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Protein sequence | MTVSPVAEPV GSLDRSGSTP LYIQLANVLR ERIERGEWKP DQKIPSENEL NRMYGISRMT ARQVLAQLVN EELLFRVQGK GTFVAHRKIG TRSPAYMGIR EQLERMGYET TTKVLSSEVI PADVRVAEHL RISPGSLVYR LSRVRLVEDE PISLHTSFVP KALAQDLDAD DLVNRQLCVV LENEHGLRMS RVNESLESTL PSADEAKLLR IRRTTPLLLL RQEISDPTGQ EFEYSRILFR GDKIRLEFQY EL
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