| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Namu_3297 |
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| Symbol | alaS |
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| ID | 8448912 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nakamurella multipartita DSM 44233 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013235 |
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| Strand | - |
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| Start bp | 3622912 |
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| End bp | 3625587 |
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| Gene Length | 2676 bp |
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| Protein Length | 891 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 645042376 |
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| Product | alanyl-tRNA synthetase |
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| Protein accession | YP_003202616 |
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| Protein GI | 258653460 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0013] Alanyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00344] alanine--tRNA ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.000320998 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.10569 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCAGACCC ACGAGATCCG GCGCCGTTTC CTGGACCACT TCGAGCGCGC CGGCCACACC
GTCGTGCCCT CGGCGTCGCT GATCAGCCAG GACGCCACCG TGCTGTTCAC CATCGCCGGG
ATGGCCCCGT TCAAGCCTTA CTTCCTGGGC CAGAGCACCC CGCCGTTCCC GCGGGCGACC
AGCGTGCAGA AGTGCGTGCG CACCGGTGAC ATCGACAACG TCGGCGTCAC CACCCGGCAC
AACACCTTCT TCCAGATGGC CGGCAACTTC TCCTTCGGCG ACTACTTCAA GGCCGGCGCC
ATCGAGCACG CCTGGACCCT GCTGACCTCC TCGCTGGCCG ACGGCGGCTA CGGCCTGGAC
CCGGACCGGC TGTGGGTCAC CGTGTACGAG TCCGACGACG AGGCCGAGCG GCTCTGGCAG
GAGATCGCCG GCCTGCCGGC CGAGCGCATC CAGCGGCGTG GCATGGCCGA CAACTTCTGG
TCGATGGGCG TGCCCGGCCC GTGCGGCCCG TGCTCGGAGA TCTACTACGA CCGCGGCCCG
GAGTACGGCA TCGAGGGCGG TCCGGTCGCC GACGAGGACC GGTACCTGGA GGTCTGGAAT
CTGGTCTTCA TGCAGGACAT GCGGGGCGAG TCCGACGGGT CCGGTAAGGG GGACTTCCCG
ATCCTGGGCC CGCTGCCCCA GCAGAACATC GACACCGGGC TGGGCGTCGA GCGGCTGGCG
TTCCTGCTGC AGGGCGTCGA CAACGTCTAC GAGACCGATC TGCTGCGCCC GATCATCGCC
TCGATGGAGC AGCTGTCCGG CAAGAAGTAC GGCGGCGGCG ACCACCAGGC CGACGTCCGC
TTCCGGGTCA TCGCCGACCA TTCCCGCAGC GGCATGATGC TGATCGGCGA CGGGGTCACC
CCCGGCAACG AGGGCCGCGG TTACGTGCTG CGCCGGCTGC TGCGCCGGGC GGTGCGCTCG
GCCCGGCTGC TCGGCGTCAC CGAGCCGGTC ATGCCGACGC TGATGAGCAT CGTGCGCGAC
CTGATGAGCC CGTCCTACCC GGAGCTGGCC ACCGACTACG AGCGGATCGA GAAGGTCGCC
GCGACGGAGG AGAAGGCGTT CCTGCGCACC ATCGCATCCG GCTCCAAGCT GTTCGACGTG
GCCGCGGCCG ACCTGGCCAC CCAGCACGTC ACCACGCTGC CCGGGGCCAC CGCCTTCACC
CTGCACGACA CCCAGGGTTT CCCGATCGAC CTGACCCTGG AGATGGCCGC CGAGGCCGGC
CTGACCGTCG ACGTCGCCGG GTTCGAGCGG CTGATGAAGG AGCAGAAGGA CCGGGCCCGG
GCCGACGCCA AGGCCCGCAA GGGCGGCTTC GCCGACCTGT CCGAGTACCG GCGGCTGCTG
GACCAGGGCG CGACCGAGTT CACCGGCTAC AGCGAGCTGC AGACCGAGGC GCGCATCCGC
GGCCTGCTGC GCGACGGGGT GCCGGTGCCG GCGGCGCACG AGGGTGAGGA GATCGAGCTC
GTGCTCGACC GCACCCCGCT GTACGCCGAA TCCGGCGGGC AGGACTCCGA CGCGGGCACC
ATCGTCGGGG CGCACGGCGC CGCCGAGGTG CTGGACGTGC AGAAGGTGGA CCGCAAGCTG
GTCGTGCACC GGGTCCGGAT CACCGACGGC GAGTTCACCA CCGGTGCGCA GGTGCTGGCC
AAGGTCGACC CGGAATGGCG GCTCGGTGCC CGGCAGGCGC ACTCGGGCAC CCACGTCGTG
CACGCCGCGC TGCGGCAGGT GCTCGGGCCG GAGGCGCTGC AGTCCGGGTC CTACAACAAG
CCCGGCTACC TGCGCCTGGA CTTCGCCTGG GACCAGGCGT TGTCGGCGGC CACCCGCAGC
GAACTGGAAG AGGTCGCCAA TCGGGCCGTT CGTCAGGACC TGCCAGTGCG CGTGCTCTAC
GGCTCGATGC AGGAGGCCCA GGCGATGGGC GCCATCGCGC TGTTCGGCGA GACCTACGAC
GACACCGTGC GGATCGTGGA GATCGGCGGG CCGTGGTCGG TCGAGCTGTG CGGCGGCACG
CACGTCGAGC ACTCCTCGCA GATCGGTCCC GTCGCCATCA CCGCCGAATC CTCGGTCGGA
TCCGGCCTGC GCCGGGTCGA GGCCGCGGTC GGCATCGAGG CCTTCCACCG GCTGGTCGCC
GAGCGCACCC TGGTCAGCCA GCTGGCCAGC ACCCTGAAGG TGCAGCCGGC CGAGCTGCCC
GGGCGCATCG AGACCCTGCT GGACAAGCTC AAGTCCGCGG AGAAGGAGCT GGCCGGGCTG
CGCGCGGCCG CGCTGGGCAA CGTCGCCGGC ACGCTGGCTG GCGGCGCGAT CGACGTGGCC
GGGGTGGCGC TGGTGGCGGC CACCGCGCCG GAGGGCACCG CGGCCGGTGA CCTGCGCACG
CTGGCCTCCG ACGTCCGCGG CCGGCTCGGG GACCGGCCCG GGGTGGTCGC CCTGTTCGCG
CCGGCCCACG CGTCGGTGCC GTTCGCGGTC GCCGTGAACC AGGGCGGCAT CGCCCGCGGG
TTGGCTGCCG GCGAGCTGGC GAAGGCGGTG CTGCCGCTGA TCGAGGGACG GGGCGGCGGC
AAGAAGGACC TGGCCCAGGG GGCCGGGACC CGTCCGGACC GGATCCCGGA GGCGATCGAC
GCCCTGCGCG CCGCCCTGCT CACGGCGGCC GGCTGA
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| Protein sequence | MQTHEIRRRF LDHFERAGHT VVPSASLISQ DATVLFTIAG MAPFKPYFLG QSTPPFPRAT
SVQKCVRTGD IDNVGVTTRH NTFFQMAGNF SFGDYFKAGA IEHAWTLLTS SLADGGYGLD
PDRLWVTVYE SDDEAERLWQ EIAGLPAERI QRRGMADNFW SMGVPGPCGP CSEIYYDRGP
EYGIEGGPVA DEDRYLEVWN LVFMQDMRGE SDGSGKGDFP ILGPLPQQNI DTGLGVERLA
FLLQGVDNVY ETDLLRPIIA SMEQLSGKKY GGGDHQADVR FRVIADHSRS GMMLIGDGVT
PGNEGRGYVL RRLLRRAVRS ARLLGVTEPV MPTLMSIVRD LMSPSYPELA TDYERIEKVA
ATEEKAFLRT IASGSKLFDV AAADLATQHV TTLPGATAFT LHDTQGFPID LTLEMAAEAG
LTVDVAGFER LMKEQKDRAR ADAKARKGGF ADLSEYRRLL DQGATEFTGY SELQTEARIR
GLLRDGVPVP AAHEGEEIEL VLDRTPLYAE SGGQDSDAGT IVGAHGAAEV LDVQKVDRKL
VVHRVRITDG EFTTGAQVLA KVDPEWRLGA RQAHSGTHVV HAALRQVLGP EALQSGSYNK
PGYLRLDFAW DQALSAATRS ELEEVANRAV RQDLPVRVLY GSMQEAQAMG AIALFGETYD
DTVRIVEIGG PWSVELCGGT HVEHSSQIGP VAITAESSVG SGLRRVEAAV GIEAFHRLVA
ERTLVSQLAS TLKVQPAELP GRIETLLDKL KSAEKELAGL RAAALGNVAG TLAGGAIDVA
GVALVAATAP EGTAAGDLRT LASDVRGRLG DRPGVVALFA PAHASVPFAV AVNQGGIARG
LAAGELAKAV LPLIEGRGGG KKDLAQGAGT RPDRIPEAID ALRAALLTAA G
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