Gene Namu_3235 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNamu_3235 
Symbol 
ID8448849 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNakamurella multipartita DSM 44233 
KingdomBacteria 
Replicon accessionNC_013235 
Strand
Start bp3563130 
End bp3564470 
Gene Length1341 bp 
Protein Length446 aa 
Translation table11 
GC content76% 
IMG OID645042314 
ProductNLP/P60 protein 
Protein accessionYP_003202555 
Protein GI258653399 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0791] Cell wall-associated hydrolases (invasion-associated proteins) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.177919 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000140663 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTCGAATC GTGGATACCC GCTGCGCTCC GCAGCCGCCG GTCGCACCAG ACCCACCGCC 
GGGGCCGTCG GCCATATCGC TCGCACCCCT CGACGCGCTC GCGTCTACCG GCTCGCCGGC
GGCATCGCCG TGGCCTGCAC CCTGCTGTCC ATCGCGGCCG CGCTTCCGGC CGCCGCCGAC
CAGCCCGTGA TCGTGGCCGA CCAGCCCGCC GCCGAGCAGC CGGCCGCCGG CCAGGCCGCC
GTCGCCGTGC CGACCACGGC CGAGGAGGCC AAGCAGGCCT GGCTGGACGC CGCCCGCCGG
GCCGAGACCT ACAACGAGCA GGTCCTCACC GCGCAGGCCG CCGTCGACGC CGCCAAGGCC
AAGTCCGATG CCGCCGCCGC CGAGCTGGCC GCCGCCGCCG ACCGCACCTC GGCCGAGCAG
CAGAAGGTCG CCGCCGCCGA CGCGGTCGTC GCCCAGTACC AGGCCAAGGT GGACGCGTTC
GCCAACGCCA GCTTCCGCGG CGCCCGGCTC AGTGACATCT CCGCCCTGTT GACCGCCGGC
AGCCCGGACG ACTACCTGGA CAAGGCCGGA TCGCTCGACC AGATCGCCAC CGACCAGCAA
GCCACCCTGA GCGGGGCGCT GGCCGCCCGC CAGATCGCGG CCGACGCCCG GACCTCGGCC
CAGGCGGCCG AGAACCAGGC CCGCGCGGCC AAGCAGGCCG CCGATCAGGC CACCGCGGAC
GCCCAGGCCG CCCGCGACGC CCTGGACACC GGCCGCGCCC AGCTGGACGG GGAGATCGCC
GTCTACCAGC TGGCCTTCGC GCAGCTCTCC TCGTCCGACG TCGACGCCGC CGTGGCCAGC
CAGGAGGCGG CCAACCTGGA CGCGGCCTCG GTCGCCCGGC AGGCCCAGCA GGCGGCCCAG
CGCGATCGCG CCGGGCTGGC CAGCGACGCC GCGCCGGTGG GCGACACCGG CCCGGCCTTC
GCTGCCTGGG CGGCCGCGCA CGCGCCGAGC GTGCAGGCCG GCATCGCCGT CGAGGCCGCG
CTGTCCCGGC AGGGTCTGCC CTACGTCTGG GGTGCGGTTG GACCGGACAC CTTCGACTGC
TCCGGCCTGA TGCTGTGGGC CTGGCAGCAG GCGGGGATCG AGATCCCCCG CAACAGCGCC
GCGCAGGCCG AACTGCCGCA GATCCCGCTC GATCAGCTGC AGCCCGGGGA CCTGGTCACC
TACTACTCGC CGGTCAGCCA CGTCGGCATG TACGTCGGCG ACGGCAAGGT GCTGCACGCC
TCGATGCCGG GGGTGCCGAT CAAGGTGGTC GACCTGGCGG CGGCCGGCCC GAACCCCACC
GGGCACGCGG TCAACCGCTG A
 
Protein sequence
MSNRGYPLRS AAAGRTRPTA GAVGHIARTP RRARVYRLAG GIAVACTLLS IAAALPAAAD 
QPVIVADQPA AEQPAAGQAA VAVPTTAEEA KQAWLDAARR AETYNEQVLT AQAAVDAAKA
KSDAAAAELA AAADRTSAEQ QKVAAADAVV AQYQAKVDAF ANASFRGARL SDISALLTAG
SPDDYLDKAG SLDQIATDQQ ATLSGALAAR QIAADARTSA QAAENQARAA KQAADQATAD
AQAARDALDT GRAQLDGEIA VYQLAFAQLS SSDVDAAVAS QEAANLDAAS VARQAQQAAQ
RDRAGLASDA APVGDTGPAF AAWAAAHAPS VQAGIAVEAA LSRQGLPYVW GAVGPDTFDC
SGLMLWAWQQ AGIEIPRNSA AQAELPQIPL DQLQPGDLVT YYSPVSHVGM YVGDGKVLHA
SMPGVPIKVV DLAAAGPNPT GHAVNR