Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Namu_3235 |
Symbol | |
ID | 8448849 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nakamurella multipartita DSM 44233 |
Kingdom | Bacteria |
Replicon accession | NC_013235 |
Strand | - |
Start bp | 3563130 |
End bp | 3564470 |
Gene Length | 1341 bp |
Protein Length | 446 aa |
Translation table | 11 |
GC content | 76% |
IMG OID | 645042314 |
Product | NLP/P60 protein |
Protein accession | YP_003202555 |
Protein GI | 258653399 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0791] Cell wall-associated hydrolases (invasion-associated proteins) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.177919 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.000140663 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGTCGAATC GTGGATACCC GCTGCGCTCC GCAGCCGCCG GTCGCACCAG ACCCACCGCC GGGGCCGTCG GCCATATCGC TCGCACCCCT CGACGCGCTC GCGTCTACCG GCTCGCCGGC GGCATCGCCG TGGCCTGCAC CCTGCTGTCC ATCGCGGCCG CGCTTCCGGC CGCCGCCGAC CAGCCCGTGA TCGTGGCCGA CCAGCCCGCC GCCGAGCAGC CGGCCGCCGG CCAGGCCGCC GTCGCCGTGC CGACCACGGC CGAGGAGGCC AAGCAGGCCT GGCTGGACGC CGCCCGCCGG GCCGAGACCT ACAACGAGCA GGTCCTCACC GCGCAGGCCG CCGTCGACGC CGCCAAGGCC AAGTCCGATG CCGCCGCCGC CGAGCTGGCC GCCGCCGCCG ACCGCACCTC GGCCGAGCAG CAGAAGGTCG CCGCCGCCGA CGCGGTCGTC GCCCAGTACC AGGCCAAGGT GGACGCGTTC GCCAACGCCA GCTTCCGCGG CGCCCGGCTC AGTGACATCT CCGCCCTGTT GACCGCCGGC AGCCCGGACG ACTACCTGGA CAAGGCCGGA TCGCTCGACC AGATCGCCAC CGACCAGCAA GCCACCCTGA GCGGGGCGCT GGCCGCCCGC CAGATCGCGG CCGACGCCCG GACCTCGGCC CAGGCGGCCG AGAACCAGGC CCGCGCGGCC AAGCAGGCCG CCGATCAGGC CACCGCGGAC GCCCAGGCCG CCCGCGACGC CCTGGACACC GGCCGCGCCC AGCTGGACGG GGAGATCGCC GTCTACCAGC TGGCCTTCGC GCAGCTCTCC TCGTCCGACG TCGACGCCGC CGTGGCCAGC CAGGAGGCGG CCAACCTGGA CGCGGCCTCG GTCGCCCGGC AGGCCCAGCA GGCGGCCCAG CGCGATCGCG CCGGGCTGGC CAGCGACGCC GCGCCGGTGG GCGACACCGG CCCGGCCTTC GCTGCCTGGG CGGCCGCGCA CGCGCCGAGC GTGCAGGCCG GCATCGCCGT CGAGGCCGCG CTGTCCCGGC AGGGTCTGCC CTACGTCTGG GGTGCGGTTG GACCGGACAC CTTCGACTGC TCCGGCCTGA TGCTGTGGGC CTGGCAGCAG GCGGGGATCG AGATCCCCCG CAACAGCGCC GCGCAGGCCG AACTGCCGCA GATCCCGCTC GATCAGCTGC AGCCCGGGGA CCTGGTCACC TACTACTCGC CGGTCAGCCA CGTCGGCATG TACGTCGGCG ACGGCAAGGT GCTGCACGCC TCGATGCCGG GGGTGCCGAT CAAGGTGGTC GACCTGGCGG CGGCCGGCCC GAACCCCACC GGGCACGCGG TCAACCGCTG A
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Protein sequence | MSNRGYPLRS AAAGRTRPTA GAVGHIARTP RRARVYRLAG GIAVACTLLS IAAALPAAAD QPVIVADQPA AEQPAAGQAA VAVPTTAEEA KQAWLDAARR AETYNEQVLT AQAAVDAAKA KSDAAAAELA AAADRTSAEQ QKVAAADAVV AQYQAKVDAF ANASFRGARL SDISALLTAG SPDDYLDKAG SLDQIATDQQ ATLSGALAAR QIAADARTSA QAAENQARAA KQAADQATAD AQAARDALDT GRAQLDGEIA VYQLAFAQLS SSDVDAAVAS QEAANLDAAS VARQAQQAAQ RDRAGLASDA APVGDTGPAF AAWAAAHAPS VQAGIAVEAA LSRQGLPYVW GAVGPDTFDC SGLMLWAWQQ AGIEIPRNSA AQAELPQIPL DQLQPGDLVT YYSPVSHVGM YVGDGKVLHA SMPGVPIKVV DLAAAGPNPT GHAVNR
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