Gene Namu_3183 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNamu_3183 
Symbol 
ID8448797 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNakamurella multipartita DSM 44233 
KingdomBacteria 
Replicon accessionNC_013235 
Strand
Start bp3505492 
End bp3506568 
Gene Length1077 bp 
Protein Length358 aa 
Translation table11 
GC content71% 
IMG OID645042263 
Productglycosyl transferase family 2 
Protein accessionYP_003202504 
Protein GI258653348 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1215] Glycosyltransferases, probably involved in cell wall biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.000292304 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000016442 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGACCCAGA TTTCCGATCG CCCGACCGCG CCCGTCATCT CGGTGATCAT GCCCGTGCGC 
AACGAGGCGG CTCACATCGA GGGAGCCCTT CGATCCGTTC TGGCGCAGAC GGTCCCCATG
GAGATTCTGG TCGTCGACGG GCGGTCGACC GACCGCACGC GCGGGATCGT CCAGAGTCTG
GCCGATCCCC GGATTCGGGT CCTGGACAAC CCGCGGCGCA TCATCCCGGC CGCGCTGAAC
GTCGGACTGG CCGATGCGCG AGGGCAGTTC GTGGCCCGGG TGGACGGGCA CATGACCATC
GGCCCGGGCT ACTTCCGCAC GGCCCTGGAC GAACTCGTCG ATCCGGAGGT GGCCGCCGTC
GGCGGGATCC GCATCGCGCA GGCGACCTCG GCGACCGGCC AGGCCATCGC CGGTGCGCTG
GGCAGTCCGT TCGGCGTCGG CAACTCGATC AACCACTATG CGACGACCCC GCAGGACACC
GATCATGCCT CGATCGGGGT CTACCGCACC GAGGTGGCCC GGTCGGTCGG CGGGTGGGAC
GAGAACCTGC TGGTGAACGA GGATGTCGAC TTCGACCATC GCATTCTGCA ACGGGGTCAC
CGCATCCGGT TCCACCCGAA CATGCAGATT CTGTGGCGGG TCCGCGAGGA CCTGCCCGCG
TTCGCCCGGC AGTACCGACG GTACGGGCGG GGCAAGGCCG GCATGATTCG CAAGAACGGC
CGATCGGCGG TTCGCGCGCG GCACCTGGCC GCTCCGCTGC TGGTCGGGGC CCTCGGGGTG
GCTACGGCGG CGTCCGCGGT CGGCCGGCCG CGCGTCGGAT TGGCGGTCGC CGCACCGTAT
GTCGGTGGGC TCACCTATGC GGCGGTGCGC ACCGCGAAGT CGAATCCGGC GGGCGGCGGG
CCGGCGATCA CCCGGCTGGT CGCGGCGTTC GCCACCATGC ACGTGACCTG GGGATTCGGG
TTTCTCGAAG GCCTGGTGCT GGGCCGGCCG CCGGCCGCCT CCACGGCGCG CGATCCGCGG
ACGGTCGATC CTCACCGATC AGCGATGGCC GCCCCCACCG AGCGGGTCCA TTCGTAG
 
Protein sequence
MTQISDRPTA PVISVIMPVR NEAAHIEGAL RSVLAQTVPM EILVVDGRST DRTRGIVQSL 
ADPRIRVLDN PRRIIPAALN VGLADARGQF VARVDGHMTI GPGYFRTALD ELVDPEVAAV
GGIRIAQATS ATGQAIAGAL GSPFGVGNSI NHYATTPQDT DHASIGVYRT EVARSVGGWD
ENLLVNEDVD FDHRILQRGH RIRFHPNMQI LWRVREDLPA FARQYRRYGR GKAGMIRKNG
RSAVRARHLA APLLVGALGV ATAASAVGRP RVGLAVAAPY VGGLTYAAVR TAKSNPAGGG
PAITRLVAAF ATMHVTWGFG FLEGLVLGRP PAASTARDPR TVDPHRSAMA APTERVHS