Gene Namu_3142 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNamu_3142 
Symbol 
ID8448756 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNakamurella multipartita DSM 44233 
KingdomBacteria 
Replicon accessionNC_013235 
Strand
Start bp3459028 
End bp3460107 
Gene Length1080 bp 
Protein Length359 aa 
Translation table11 
GC content74% 
IMG OID645042223 
Productamidohydrolase 
Protein accessionYP_003202464 
Protein GI258653308 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1228] Imidazolonepropionase and related amidohydrolases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.000508689 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.129698 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCCCGG ACCTGCGGGT CCGGGGAACC GACCCGACGA CCGGAGAGCC GGTCGACCTG 
GCCGTCTCCG GCGGCCGGAT CGTGGACGGC GCGGCGGCCG AGGCGGTGAC CGTCACCGGC
TTCGTGGTGC CCGGCTTCGT CGACGCGCAC TGCCATGTCG GGTACTCCCC GCACGGGCCG
GCCACGCCCG CCGAGGCCGA GCAGCAGGCC CTGGCCAACC TGCGGGCCGG GGCGCTGGCC
CTGCGTGACT GCGGCTCGCC GGTGGACACC CGCGAGCTGG TCGATCGCGA CGACCTGCCG
GTGCTGATCC GGTCCGGCCG GCATGTCGCC TTCGTCAAGC GCTACATCCG GGACCTGGGC
GTCGATCTGG ATGATCCGGC GGACCTGCCG GCCGAGGTGG CCCGCCAGAT CGCGTACGGC
AGCGGGCAGT GGGTCAAGAT CGTCGGCGAC TGGATCGACC GGGACATCGG CGACCTGGCC
CCGCTGTGGC CGGACGACGT GCTGGCCCGG GCGGTCGCCG TCGCGCACGC GGCCGGCTGC
CGGGTGACCA CGCACGTCTT CGGCGAGGAC GCACTGCCCG GGCTGCTGGC CGCCGGGGTC
GACTGCATCG AGCACGGCAC CGGGCTGACC GAGCAGACCA TCGCCACCGC CGCCGCGCAG
GGCACCCACC TGGTGCCGAC GTTGATCAAC ATCGAGAACT TCCCGTCGTT CGCGGCCCAG
GCGAACCGGT TCCCGACCTA CGCCGCGCAC ATGCTGGACC TGCACCGGCG GCACCTGGAC
CGGGTCCGCG ACGCGGTCGA TGCCGGGGTC GCGGTGCACG CCGGCACCGA CGCGGGCGGT
TACATCGAGC ACGGCCGGAT CGCCGACGAG GTGATCGCTC TTGGCCAGGT GCTGGGCATG
CGCCGGGCCC TGGCCGCGGC CGCGCACGAG GCCCGGCAGT GGCTGGGCGT GCCGGGCACC
GAGGTGGGCG ACCCGGCCGA CCTGGTCGTC TTCGACGAGG ACCCGACGCA GGATCCGACC
GTGTTGAAAC GGCCGGCCCT GATCATCAGG GCCGGCCGGG TGGTGCGGGG ACAGCTGTAG
 
Protein sequence
MSPDLRVRGT DPTTGEPVDL AVSGGRIVDG AAAEAVTVTG FVVPGFVDAH CHVGYSPHGP 
ATPAEAEQQA LANLRAGALA LRDCGSPVDT RELVDRDDLP VLIRSGRHVA FVKRYIRDLG
VDLDDPADLP AEVARQIAYG SGQWVKIVGD WIDRDIGDLA PLWPDDVLAR AVAVAHAAGC
RVTTHVFGED ALPGLLAAGV DCIEHGTGLT EQTIATAAAQ GTHLVPTLIN IENFPSFAAQ
ANRFPTYAAH MLDLHRRHLD RVRDAVDAGV AVHAGTDAGG YIEHGRIADE VIALGQVLGM
RRALAAAAHE ARQWLGVPGT EVGDPADLVV FDEDPTQDPT VLKRPALIIR AGRVVRGQL