| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Namu_3093 |
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| Symbol | |
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| ID | 8448707 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nakamurella multipartita DSM 44233 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013235 |
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| Strand | + |
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| Start bp | 3411972 |
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| End bp | 3414236 |
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| Gene Length | 2265 bp |
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| Protein Length | 754 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 645042175 |
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| Product | 1,4-alpha-glucan branching enzyme |
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| Protein accession | YP_003202416 |
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| Protein GI | 258653260 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0296] 1,4-alpha-glucan branching enzyme |
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| TIGRFAM ID | [TIGR01515] alpha-1,4-glucan:alpha-1,4-glucan 6-glycosyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.000057482 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.000000447753 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | GTGACCGGCG CCGTCGTCGA GACCCCGTTG GCCCCCGACG AGCCGACCAG CACCGAGGCC
GTCGCCGCGA CCCCCGATCC CGCTCCGGCG ACGGTGGCCG AGCCGTCGGT CGAGGACTAC
GAGCGCCTGA TCGGCGGCGA CACCCACGAT CCGCACGGCA TCCTGGGCGC CCACCCGCGC
GGCGACGGGC ACACCGTCAT CCGCACCCTG CGGCACAACG CGCAGTCGGT CACCCTGCTG
CACGAAGGGA CCGAGACCCC GTTCGAGCAC GCCCACGGCG GCGTGTTCAC CGCGGTGATC
GAGGGACCGG TCACCGACTA CCGGATCCGG GTCGACTACG GCCAGGACTC GGTCTACGAG
GTCGACGACC CGTACCGCTG GCTGCCCACC CTGGGCGACA TCGACCTGCA CCTGATCGGC
GAGGGCCGGC ACGAGAACCT GTGGGAGGTG CTCGGCGCGC ACGTGCGCAG CTACGACACC
CCCGGCGGCA CCGTCACCGG CACCTCGTTC GCGGTGTGGG CGCCCAACGC CCGCGGCGTG
CGCGTCACCG GCGACTTCGA CTACTGGTCG GGCGCCGGCA CCCCGATGCG CTCGCTGGGC
TCCTCCGGCG TCTGGGAGCT GTTCGTGCCC GGCATCGGCG AGGGAACCCG GTACAAGTAC
CAGATCCTGG GCCAGGACGG GGTGTGGCGG GAGAAGGCCG ACCCGTTCGC GTTCGCCATC
GAGGTGCCGC CGGCCACCGC GTCGATCGTC ACCACGGCCA CGCACGAGTG GGGCGACGAG
GACTGGATCG CCCGCCGGGC CGAGACCGAC CAGCTGGCCA GCCCGATCTC CATCTACGAG
ATCCACGCCG GCTCCTGGCG GGAGGGCCTG AGCTACCGGG AGATGGCCGA CGCACTGATC
GAGGATCTGG CCGACACCCA GTTCACCCAC GTCGAGTTCC TGCCGCTGGC CGGTCACCCG
TTCGCCCCGT CCTGGGGCTA TCAGGTCACC TCCTACTACG CCTCGGACTC GCGGTTCGGC
TCCCCCGACG ATCTGCGGTA CCTGATCGAC CGGCTGCACC AGGCCGGCAT CGGCGTCATC
CTGGACTGGG TGCCGGCGCA CTTCCCCAAG GACGAGTGGG CGCTGGGCCG CTTCGACGGC
ACCTCGCTGT ACGAGCACGC CGACCCGCGC CGCGGCGAGC AGCCCGACTG GGGCACCTTC
GTGTTCGACT TCGGCCGGCG CGAGGTCCGC AACTTCCTGG TCGCCAACGC GCTGTACTGG
CTCGAGGAGT TCCACGTCGA CGGCCTGCGG GTGGATGCGG TCGCCTCGAT GCTGTACCTG
GACTACTCGC GCGAGGATGG GCAGTGGCTG CCCAACATCT ACGGCGGCAA CGAGAACCTG
GACGCGGTGG CGTTCCTGCA GGAGACCAAC GCCACGGTCG GCAAGCGCGT CCCCGGCGCG
TTGATGATCG CCGAGGAGTC GACCGCGTGG CCGGGCGTCA CCCGGCCCAC CCATCTGGGC
GGCCTGGGCT TCCACCTGAA GTGGAACATG GGCTGGATGC ACGACAGCCT GGGCTACGTC
TCGCGGGACC CGATCTATCG GTCCTGGCAC CACAACGAGA TGACCTTCTC GCTGATGTAC
GCGTTCTCCG AGCAGTTCGT GCTGCCCATC TCGCACGACG AGGTGGTGCA CGGCAAGGGC
TCGCTGTGGT CGAAGATCCC CGGCGACGAG TGGCAGAAGG CGGCCACCCT GCGCACCTTC
CTGGCCCACC AGTGGGCGCA CCCGGGCAAG CAGCTGCTGT TCATGGGTCA GGAGCTGGGC
AACCCCTGGG AGTGGAACCA GGCCATCCAG CTGCCGTGGC AGCTCAAGGA CTACCCGCTG
CATGCCGGCA TCCGGTCCCT GGTCGGTGAC CTGAACCGGG TCTACCGGTC CAGCCCGGCG
CTGTACACCC AGGACTTCAC CCCGGCCGGC TTCACCTGGC TGGACGCCAA CGACCGGGAG
GGCAACGTCC TGGCCTACCT GCGGTGGGGC AGCGACGGGT CGGTGCTGGC CTGCGTGCTC
AACTTCTCGC CGATGCCGCA CAGCGGTTAC CGGATCGGGC TGCCGTTCGC GGGCGTCTGG
AAGGAAGCGG TCAACACCGA CTCCGAGCTC TACGGCGGAT CCGGCGCCGG CAACATGGGC
GCGGTGATGG CCACCGAGCA CGCCTCGCAC GGACAGCCGG CGTCGGCGAC GATCACCGTC
CCGCCGCTGG GTGCGCTGTG GTTGGTGCCC GAATCCGAGG GGTGA
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| Protein sequence | MTGAVVETPL APDEPTSTEA VAATPDPAPA TVAEPSVEDY ERLIGGDTHD PHGILGAHPR
GDGHTVIRTL RHNAQSVTLL HEGTETPFEH AHGGVFTAVI EGPVTDYRIR VDYGQDSVYE
VDDPYRWLPT LGDIDLHLIG EGRHENLWEV LGAHVRSYDT PGGTVTGTSF AVWAPNARGV
RVTGDFDYWS GAGTPMRSLG SSGVWELFVP GIGEGTRYKY QILGQDGVWR EKADPFAFAI
EVPPATASIV TTATHEWGDE DWIARRAETD QLASPISIYE IHAGSWREGL SYREMADALI
EDLADTQFTH VEFLPLAGHP FAPSWGYQVT SYYASDSRFG SPDDLRYLID RLHQAGIGVI
LDWVPAHFPK DEWALGRFDG TSLYEHADPR RGEQPDWGTF VFDFGRREVR NFLVANALYW
LEEFHVDGLR VDAVASMLYL DYSREDGQWL PNIYGGNENL DAVAFLQETN ATVGKRVPGA
LMIAEESTAW PGVTRPTHLG GLGFHLKWNM GWMHDSLGYV SRDPIYRSWH HNEMTFSLMY
AFSEQFVLPI SHDEVVHGKG SLWSKIPGDE WQKAATLRTF LAHQWAHPGK QLLFMGQELG
NPWEWNQAIQ LPWQLKDYPL HAGIRSLVGD LNRVYRSSPA LYTQDFTPAG FTWLDANDRE
GNVLAYLRWG SDGSVLACVL NFSPMPHSGY RIGLPFAGVW KEAVNTDSEL YGGSGAGNMG
AVMATEHASH GQPASATITV PPLGALWLVP ESEG
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