| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Namu_3083 |
|---|
| Symbol | |
|---|
| ID | 8448697 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nakamurella multipartita DSM 44233 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013235 |
|---|
| Strand | + |
|---|
| Start bp | 3398837 |
|---|
| End bp | 3399829 |
|---|
| Gene Length | 993 bp |
|---|
| Protein Length | 330 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 645042165 |
|---|
| Product | Integrase catalytic region |
|---|
| Protein accession | YP_003202406 |
|---|
| Protein GI | 258653250 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.00428734 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 5 |
|---|
| Fosmid unclonability p-value | 0.0000289484 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | GTGGCCCACC GTAACGCCCC GCTGACCCCC GAGGGACGCC GACGCCTGTG CCAGCGCGTC
GACGCCGGTC GGCCGATCTG TCACGTCGCC GCCGAGGCCG GCGTGGCCCG GCAAACCCTG
GCCAAGTGGC ACGCCCGCTG GAAGGCCGAC GGTCCGGCCG GCCTGCAGGA CCGCTCGTCG
CGCCCGGTGT CCTCACCCGG CCAGGTCGAC GCGCAGGTCG AGGACGTCGT GGAGTATCTG
CGGCGGCACC TCAAGCTCGG TCCGGTGATG CTGGCCGCGG AGCTGCGCGA GTTCGGGATC
ACGCTGGCGC CGTCGACGAT CCACCGGGTC CTGGTGCGCC GGGGCATCTC TCGCCTGCGG
GACCTGGACG TCACCGGCCA GCAGCTGCGG GAACCGGTCC GCCGGTACGA GTGGGCCGCG
CCCGGTGACC TGATCCACGT CGATGTGAAG AAGATTGGCC GCATCCCCGA CGGCGGCGGC
TGGCGGATCC ACGGCCGGGG CAACGACGCC CACCGAGCCT CCCAGCGGGG TCAGCGACCC
GGGTACGCGT TCCTGCACAC CGCGATCGAT GACCGGTCCC GGCTGGCCTA CACCGAAGAA
CTGGCCGACG AGAAGTCCGT GACCGCGGCC GGTTTCTGGG CCCGCGCGGT CGAGTTCTTC
GCCGCGCACG GCATCGAGAG GATCCACCGG GTGCTGACCG ACAACGGTTC CTGCTACCGC
GGCAAGGACT TCAACACCGC GCTGGGGGCC ACGGTCCACA AGTACACCCG ACCGTACCGA
CCGCAGACCA ACGGAAAGGT CGAGCGGTAC CACCGGACCC TGGCCCGGGA ATGGGCCTAC
CGCCAGGCCT GGTCCTGCAA CGACGAACGA GCCGCCGCCC TGGCCGGGTT CGTGCACCGC
TACAACTACC ATCGGCCGCA CACCGCGCTG AAGGGCAAAC CGCCCGCCTA CCGCACGCCA
GCCGTTACCA ACCTGTCCGG GCTCAACACC TAG
|
|---|
| Protein sequence | MAHRNAPLTP EGRRRLCQRV DAGRPICHVA AEAGVARQTL AKWHARWKAD GPAGLQDRSS
RPVSSPGQVD AQVEDVVEYL RRHLKLGPVM LAAELREFGI TLAPSTIHRV LVRRGISRLR
DLDVTGQQLR EPVRRYEWAA PGDLIHVDVK KIGRIPDGGG WRIHGRGNDA HRASQRGQRP
GYAFLHTAID DRSRLAYTEE LADEKSVTAA GFWARAVEFF AAHGIERIHR VLTDNGSCYR
GKDFNTALGA TVHKYTRPYR PQTNGKVERY HRTLAREWAY RQAWSCNDER AAALAGFVHR
YNYHRPHTAL KGKPPAYRTP AVTNLSGLNT
|
|---|
| |