Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Namu_2972 |
Symbol | |
ID | 8448585 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nakamurella multipartita DSM 44233 |
Kingdom | Bacteria |
Replicon accession | NC_013235 |
Strand | + |
Start bp | 3257300 |
End bp | 3258505 |
Gene Length | 1206 bp |
Protein Length | 401 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 645042057 |
Product | membrane protein-like protein |
Protein accession | YP_003202299 |
Protein GI | 258653143 |
COG category | [S] Function unknown |
COG ID | [COG4129] Predicted membrane protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.0211258 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.0161367 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGATCCCG CACCGTCTTC CACCGCCCGG GACGGGACCG ACGCGACCTC GCTGGAAGTG ATCCGTCGCC GCTGGGACGC CCTGCGCACC GGCCGCCAGC GGCGGCACCG CTCGATCGGC GAGCTGCTGG AGATCGACCG GGGCGTCATC GTGCAGACCG TCAAGGTGGC CGTCTCAGCC GGTCTGTCCT GGGCACTGGC CCAGTGGTGG CTGGATTCGC CGGCGCCCAT CTGGGCCCCG ATCACCGCGT CCCTGATCGC CCTGCTGACC GTCCGCGCGT CGATCCGGGA CGCCGCCGAG AAGGTGCTGG CGGTCACCCT GGGCATCCTG GTGGCGATCT GGTTGGGCAG CATCATCGGC CTGCACGCCT GGTCGATCGC GCTGATCGTG GCCATCGGCT TCCTGGCCGG CAAAGTGCTG CGCCTGGGCC CGGGCGCGGC CGCGCAGATC CCGATCAACG GGCTGTTCGT GCTGGCCCTG GGCAGCTCCG GGATCGAGCA GCGGTTCCTG GACACACTGA TCGGCGCGGG CGTCGCGGTC GTCGTCAACT TCGTCATCAT CCCGCCCAAC CACGTCGCCG CGGCCACCCG GGCGGTAGCC ACTCTGGCCG ACGGCGTGGT CGACGCGATG AGCACCATGG CCACCGGGAT CGGTCGGCCC TGGCCCTCCC GGGACGCGAT GGCCTGGCTG CTCGACGCCC GGGCGCTGGG CCGGCTGTCG GCCGGCGCCG AGGGTGAGGT GGGCAAGGCC GCCCAGTCGT TGTCGCTGCA TCCGACCCGC GCGTCCTGGG CGGCGTCGAT GACCCGGCTG CGGCAGGCCA ACGAGACCCT GCAGGTCGTC GAGCTGCAGT GCCGCACCAT TGCCCGGACC GTGCGGGACC TGTCGGTGAA GATTCCCGAG CGGGACGGCC GGCAATTGCC GATGCCGATG GCCTCGGCCA TGCTGCTGGC CACCGCCGAC GCGGTGGAGG CGTTTGCCCA CACCGTGCTG CGGGCCGAAC GCGGCGCATC CGTCGAGGTC ATCGCCGGCC CGGCGCACCG CGCCATCACC ATCGCCCGGG AGCGGATCGA GGCGATCAAC ACCGATCTGG GCGACATGCT GGCCGCCAAC CTGTCCCGCG GGGTGTTCCT GAGCGCGCTG GTCGTCGAGA CCGGCCGCGT CCTGGACGAG CTGGACGCGG GGCTGGCCGC CCTGGACAGC GACTGA
|
Protein sequence | MDPAPSSTAR DGTDATSLEV IRRRWDALRT GRQRRHRSIG ELLEIDRGVI VQTVKVAVSA GLSWALAQWW LDSPAPIWAP ITASLIALLT VRASIRDAAE KVLAVTLGIL VAIWLGSIIG LHAWSIALIV AIGFLAGKVL RLGPGAAAQI PINGLFVLAL GSSGIEQRFL DTLIGAGVAV VVNFVIIPPN HVAAATRAVA TLADGVVDAM STMATGIGRP WPSRDAMAWL LDARALGRLS AGAEGEVGKA AQSLSLHPTR ASWAASMTRL RQANETLQVV ELQCRTIART VRDLSVKIPE RDGRQLPMPM ASAMLLATAD AVEAFAHTVL RAERGASVEV IAGPAHRAIT IARERIEAIN TDLGDMLAAN LSRGVFLSAL VVETGRVLDE LDAGLAALDS D
|
| |