Gene Namu_2972 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNamu_2972 
Symbol 
ID8448585 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNakamurella multipartita DSM 44233 
KingdomBacteria 
Replicon accessionNC_013235 
Strand
Start bp3257300 
End bp3258505 
Gene Length1206 bp 
Protein Length401 aa 
Translation table11 
GC content72% 
IMG OID645042057 
Productmembrane protein-like protein 
Protein accessionYP_003202299 
Protein GI258653143 
COG category[S] Function unknown 
COG ID[COG4129] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.0211258 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.0161367 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATCCCG CACCGTCTTC CACCGCCCGG GACGGGACCG ACGCGACCTC GCTGGAAGTG 
ATCCGTCGCC GCTGGGACGC CCTGCGCACC GGCCGCCAGC GGCGGCACCG CTCGATCGGC
GAGCTGCTGG AGATCGACCG GGGCGTCATC GTGCAGACCG TCAAGGTGGC CGTCTCAGCC
GGTCTGTCCT GGGCACTGGC CCAGTGGTGG CTGGATTCGC CGGCGCCCAT CTGGGCCCCG
ATCACCGCGT CCCTGATCGC CCTGCTGACC GTCCGCGCGT CGATCCGGGA CGCCGCCGAG
AAGGTGCTGG CGGTCACCCT GGGCATCCTG GTGGCGATCT GGTTGGGCAG CATCATCGGC
CTGCACGCCT GGTCGATCGC GCTGATCGTG GCCATCGGCT TCCTGGCCGG CAAAGTGCTG
CGCCTGGGCC CGGGCGCGGC CGCGCAGATC CCGATCAACG GGCTGTTCGT GCTGGCCCTG
GGCAGCTCCG GGATCGAGCA GCGGTTCCTG GACACACTGA TCGGCGCGGG CGTCGCGGTC
GTCGTCAACT TCGTCATCAT CCCGCCCAAC CACGTCGCCG CGGCCACCCG GGCGGTAGCC
ACTCTGGCCG ACGGCGTGGT CGACGCGATG AGCACCATGG CCACCGGGAT CGGTCGGCCC
TGGCCCTCCC GGGACGCGAT GGCCTGGCTG CTCGACGCCC GGGCGCTGGG CCGGCTGTCG
GCCGGCGCCG AGGGTGAGGT GGGCAAGGCC GCCCAGTCGT TGTCGCTGCA TCCGACCCGC
GCGTCCTGGG CGGCGTCGAT GACCCGGCTG CGGCAGGCCA ACGAGACCCT GCAGGTCGTC
GAGCTGCAGT GCCGCACCAT TGCCCGGACC GTGCGGGACC TGTCGGTGAA GATTCCCGAG
CGGGACGGCC GGCAATTGCC GATGCCGATG GCCTCGGCCA TGCTGCTGGC CACCGCCGAC
GCGGTGGAGG CGTTTGCCCA CACCGTGCTG CGGGCCGAAC GCGGCGCATC CGTCGAGGTC
ATCGCCGGCC CGGCGCACCG CGCCATCACC ATCGCCCGGG AGCGGATCGA GGCGATCAAC
ACCGATCTGG GCGACATGCT GGCCGCCAAC CTGTCCCGCG GGGTGTTCCT GAGCGCGCTG
GTCGTCGAGA CCGGCCGCGT CCTGGACGAG CTGGACGCGG GGCTGGCCGC CCTGGACAGC
GACTGA
 
Protein sequence
MDPAPSSTAR DGTDATSLEV IRRRWDALRT GRQRRHRSIG ELLEIDRGVI VQTVKVAVSA 
GLSWALAQWW LDSPAPIWAP ITASLIALLT VRASIRDAAE KVLAVTLGIL VAIWLGSIIG
LHAWSIALIV AIGFLAGKVL RLGPGAAAQI PINGLFVLAL GSSGIEQRFL DTLIGAGVAV
VVNFVIIPPN HVAAATRAVA TLADGVVDAM STMATGIGRP WPSRDAMAWL LDARALGRLS
AGAEGEVGKA AQSLSLHPTR ASWAASMTRL RQANETLQVV ELQCRTIART VRDLSVKIPE
RDGRQLPMPM ASAMLLATAD AVEAFAHTVL RAERGASVEV IAGPAHRAIT IARERIEAIN
TDLGDMLAAN LSRGVFLSAL VVETGRVLDE LDAGLAALDS D