| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Namu_2953 |
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| Symbol | |
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| ID | 8448566 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nakamurella multipartita DSM 44233 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013235 |
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| Strand | - |
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| Start bp | 3235007 |
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| End bp | 3237829 |
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| Gene Length | 2823 bp |
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| Protein Length | 940 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 645042038 |
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| Product | DSH domain protein |
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| Protein accession | YP_003202280 |
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| Protein GI | 258653124 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4581] Superfamily II RNA helicase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0000014502 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.00117174 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGACCCAGG ACAGTCGAAC ACCGCACGAG GACGGGTCAC CGGCGGATCG GTACGCCCGC
GCCCAGGTGG CGCAGGCGGC CCGCCGCCAG TACCCGAAGC TGGCCGAGTT CGTGCTGACC
CGGCCGTTCG CGCTCGATCC CTTCCAGGTA CAGGGGTGCC AGGCGCTGGA GGACGGCCGG
GGCGTGCTGG TGTGCGCGCC GACCGGTGCC GGCAAGACGG TCGTCGGTGA GTTCGCGGTG
CACCTGGCGC TGGCCTCGGG CGGCAAGTGC TTCTACACGA CCCCGATCAA GGCGCTGTCC
AACCAGAAGT TCGTCGATCT GATCGCCCAG TACGGACCGG ACCGGGTGGG CCTGCTGACC
GGCGACACCT CGGTCAATTC CCATGCGCCG GTGGTGGTGA TGACCACCGA AGTGCTGCGC
AACATGCTCT ACGCCGGATC CCCGGACCTG GCCGAGCTCA CCCACGTGGT GCTCGACGAG
GTGCACTACC TGGCCGACAA GTTCCGCGGG CCGGTGTGGG AGGAGGTCAT CCTGCACCTG
GCCGCCGACG TGGCCGTCGT CGGCCTGTCG GCCACGGTAT CCAACGCCGA GGAGTTCGGC
GCCTGGTTGG CCGAGGTGCG CGGCGAGCTG GCCGTCGTCG TCGACGAGGT GCGGCCGGTT
CCGCTGTGGC CGCACATGAT GGTCGGGCGA CGGCTGTTCG ACCTGTTCAG CGTGCGCGAC
CAGGAGGCCG GCCCGTCCGA CCCGCCCGGC TCGGGGCAGC TGCGGATCGA CCCGGCCCTG
ACCCGGGCCA TCCACGACGC CGAGGCGCTG GCCGACCGTT TCGGCGGCGG CGGGTCACGG
GTGGGCCGCC GGGGGGAGCG GGGACGGCCG CCGGGCGGCC CGCGCTGGCG TCCGCCGAAC
CGGGTCGACG TCATCGAGCG GCTGGACATG GCCGGGCTGC TGCCGGCCAT CACCTTCATC
TTCTCCCGGG CCGGGTGCGA CGCCGCGGTC GCCCAGTGCG TCCGCTCCGG GCTGCGGCTG
ACCACCGAGC ACGAGCGGGA CGAGATCCGG CAGATCGTCG ACCGGCGCAC AGTGGAGCTG
CTGGACGCCG ACCTCGGGGT GCTGGGCTAC TGGGAGTGGC GCGAGGGCCT GGAACGAGGG
GTGGCCGCGC ACCACGCCGG CCTGCTGCCG GTGTTCAAGG AAACCGTCGA GGAGTTGTTC
GTCGCCGGCC TGGTCAAGGC CGTCTTCGCC ACCGAGACGC TGGCCCTGGG CATCAACATG
CCGGCCCGCA CGGTAGTGCT GGAGAAGCTG GGCAAGTTCA ACGGGGAGAG CCACGCGGAT
CTGACCGCCG GGGAATACAC GCAGCTGACC GGCCGGGCCG GCCGCCGGGG CATCGACGTC
GAAGGCCACG CGGTGGTGCT GTGGTCGCCG GGAATGGACC CGCGGGTGGT GGGCGGGCTG
GCCTCGCGGC GCACCTACCC GCTGCGCTCC TCGTTCCGGC CCAGCTACAA CATGGCGGTC
AACCTGGTCG ACCGGCTCGG CCGGCAGGCG GCCCGGGCAC TGATCGAGCA ATCCTTCGCC
CAGTACCAGG CCAACGGCGC GGTGGTCGGC ATGGCCCGTC AGGTCTCCCG CAACACCGAG
GCCATCGCCG CGCATCAGCG AACCATGCAG TGCCATCTGG GCGACACCGC CGAATACCTG
GGCCTGCTGA CCGAGCTGGC CGATGCGGAA CGGGAGATCG CCCGGGCCGG GGCCGCCCGC
CGGCGCGACG CCACCGCCCA GGACCTGGCC GAACTGCGGC GCGGCGACGT GATCGAGGTG
CCGACCGGGC GGCGGTCCGG CCTGGCCGTC GTGCTCGATC CCGGGGTCGA TCCGGACGGT
TCGGCCCGGC CCCTGGTGGT CACCGCCGGC CGCTGGGCCG GCCGGCTGTC CGCCGCCGAC
TTCCGCGGCC GGGTGCCCGC CTTGGGCCGG GTCAAGCTGG GCAAGTTCAC CGACCACCGT
TCACCCAAGG TCCGGCGGGA CCTGTCCTCG GCGATCGCCT CCTCCGGTAT CCGCGCGCCC
GGCCGGGACC GGCGGGCGGC CCGCGGGCAC GACGCCGCCT CGGCCGACGA GATGGACCTG
ACCGTGCTGC GCAAGGCGAT CCGGGCGCAT CCGGTGCACG GCTGCAGCGA CCGCGAGGAG
CACCTGCAGT GGGCCCGCCG GTGGCGCCGG CTGATCGCCG AGAACGAGGC CCTGGCCGCC
AAGGTTGCGG CGGCGACCGG ATCCCTGGGT CAGGCGCTGG ACCGGATCGT GCGCCTGCTG
ACCGACGAGG GGTACCTGGA CGGCGACGCG CTGACCGACG ACGGCCGGAT GCTGGCCCGG
ATCTGGTGCG AGAGCGACCT GGTGGTGGCC GAGTGCCTGC GCCGCGGCAC CTGGACCGGC
GCGTCCCCGC CGGCGCTGGC CGCGGCGGTG TCCTGCCTGA TCTTCGAATC GCGCCGCGAC
AACCCGGGCA TGAGCCGGAT CGCCGTCGGC GAGATCGGCG ACCTGGTGTC GGCGACCGTG
GACGTGTGGG CCCGGATCGC CGGTGCGGAG CGGGAGATCG GCCTGCCGGC GACCCGCGAC
GTCGACCCCG GGTTTGCCGC CGCGGTCGCC GCCTGGTGCC GGGGGGCGTC GCTGGCCGAG
ACCCTGACGG TGGCGGTCAG TGGCGGAACC GACATCTCCG CCGGGGATTT CGTGCGCTGG
TGCCGGCAGG TGGTCGATCT GCTCGACCAG ATCGCGGGCG TCGCGCCGGC GCCGGTGGCC
GCGATCGCCC GGTCGGCGGT CGGATCTTTG CGGCGCGGCG TGGTATCCCT CGGCGCCGCC
TGA
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| Protein sequence | MTQDSRTPHE DGSPADRYAR AQVAQAARRQ YPKLAEFVLT RPFALDPFQV QGCQALEDGR
GVLVCAPTGA GKTVVGEFAV HLALASGGKC FYTTPIKALS NQKFVDLIAQ YGPDRVGLLT
GDTSVNSHAP VVVMTTEVLR NMLYAGSPDL AELTHVVLDE VHYLADKFRG PVWEEVILHL
AADVAVVGLS ATVSNAEEFG AWLAEVRGEL AVVVDEVRPV PLWPHMMVGR RLFDLFSVRD
QEAGPSDPPG SGQLRIDPAL TRAIHDAEAL ADRFGGGGSR VGRRGERGRP PGGPRWRPPN
RVDVIERLDM AGLLPAITFI FSRAGCDAAV AQCVRSGLRL TTEHERDEIR QIVDRRTVEL
LDADLGVLGY WEWREGLERG VAAHHAGLLP VFKETVEELF VAGLVKAVFA TETLALGINM
PARTVVLEKL GKFNGESHAD LTAGEYTQLT GRAGRRGIDV EGHAVVLWSP GMDPRVVGGL
ASRRTYPLRS SFRPSYNMAV NLVDRLGRQA ARALIEQSFA QYQANGAVVG MARQVSRNTE
AIAAHQRTMQ CHLGDTAEYL GLLTELADAE REIARAGAAR RRDATAQDLA ELRRGDVIEV
PTGRRSGLAV VLDPGVDPDG SARPLVVTAG RWAGRLSAAD FRGRVPALGR VKLGKFTDHR
SPKVRRDLSS AIASSGIRAP GRDRRAARGH DAASADEMDL TVLRKAIRAH PVHGCSDREE
HLQWARRWRR LIAENEALAA KVAAATGSLG QALDRIVRLL TDEGYLDGDA LTDDGRMLAR
IWCESDLVVA ECLRRGTWTG ASPPALAAAV SCLIFESRRD NPGMSRIAVG EIGDLVSATV
DVWARIAGAE REIGLPATRD VDPGFAAAVA AWCRGASLAE TLTVAVSGGT DISAGDFVRW
CRQVVDLLDQ IAGVAPAPVA AIARSAVGSL RRGVVSLGAA
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