| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Namu_2796 |
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| Symbol | |
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| ID | 8448409 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nakamurella multipartita DSM 44233 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013235 |
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| Strand | + |
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| Start bp | 3066489 |
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| End bp | 3068528 |
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| Gene Length | 2040 bp |
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| Protein Length | 679 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 645041888 |
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| Product | excinuclease ABC, C subunit |
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| Protein accession | YP_003202130 |
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| Protein GI | 258652974 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0322] Nuclease subunit of the excinuclease complex |
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| TIGRFAM ID | [TIGR00194] excinuclease ABC, C subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.000172579 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.00000392618 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | GTGCCGGATC CAGCCGTCTA TCGCCCCGCC CCCGGCACGA TTCCGGAGTC GCCCGGCGTG
TACAAGTTCC GCGACCCCAA GGGCCGCGTG ATCTACGTCG GCAAGGCCAA GAGCCTGCGC
CAGCGGTTGA ACTCGTACTT CGCCGACATC GCCGCGCTGC ACCCGCGGAC CCGGCAGATG
GTGACCAGCG CCGGCAGCGT GGAGTGGACC GTGGTGTCCA CCGAGGTCGA GGCGCTGCAG
CTGGAATACA ACTGGATCAA GGAGTTCGAC CCGCGGTTCA ACGTCCGCTA CCGCGACGAC
AAGTCCTACC CGTTCCTGGC CGTGACGGTC GGCGAGGAGT ACCCGCGGCT GCAGGTGATG
CGCGGTGCCC ACCGCAAGGG GGTGCGCTAC TTCGGGCCGT ACGCCCACGC CTGGGCCATC
CGGGAGACCC TGGACCTGCT GCTGCGGGTG TTCCCGGCCC GGACCTGCTC GGCCGGGGTG
TTCCGCCGGT CGGCGCAGAT CGGCCGGCCC TGCCTGCTCG GCTACATCGG CAAGTGCTCG
GCGCCGTGCG TCGGCCGGGT CAGCGCGCAG GAGCACCGGG AGATCGTCGA GGGCTTCTGC
GACTTCATGG CCGGCAAGGC CGACCCGCTG ATCCGCCGGC TGGAGAAGCA GATGACGGCC
GCGGCCGCCG ATCTGGACTT CGAGCGGGCG GCCCGGCTGC GCGACGATCT GTCCGCGGTG
CGTCGGGCGG TGGAGAAGCA GGCAGTGGTC TTCGGCGACG GCACCGACGC CGACGTGATC
GGCATCGCGG CCGACGAACT GCTGGCCAGC GTGCAGCTGT TCCACGTCCG CGACGGCCGG
GTCCGCGGCG AACGCGGCTG GATCGTCGAC GTCGACGCCG ACGTGGACGC CGACGGCAAC
GACCGGGACG GTCTGCCCTT GCTGGTGGAG AACTTCCTGC TGCAGTTCTA CGGCGACCTG
GCCGCGGACG GCGATGCCGG CGGGCCGACC TCGTCGGTGC CGCGGGAGAT CCTGGTGCCG
GTGCTGCCCA GCCAGGACGC CGGCACCCAC GACGAGATGG TCGACTGGCT TTCCGCATTG
CGGGGCTCGC GGGTGTCGCT ACGGGTGGCC CAACGCGGGG ACAAGCGGGC GCTGGCCGAG
ACCGTGGCCC GCAATGCCCA GGAGGCGCTG ACCCGGCACC GGCTCAAGCG GGCCGGCGAC
CTGACCGCCC GCTCGGCCGC TCTGTCCGAG CTCGGCGAGA CCCTGGGCAT GGACGTGGCC
CCGCTGCGCA TCGAGTGCAT CGACATCTCG CACGTGCAGG GCACCGACGT GGTCGCCTCC
CTGGTCGTGT TCGAGGACGG GCTGGCCAAG CGCAGCGACT ACCGCCGCTT CGCCATCCGG
GACAAGCCCG GCGACGACGT CGCCTCGATC GCCGAGGTGG TCCGGCGCCG GTTCACCCAC
CAGGCCAGGG CCGAGGCGGG GGAGCGGGCC GAGGCCGACT CGACCCCGGC CCCGACCCCG
ACCCCGACAC CGGCCGGCTC CGGGGTGCCG GCCGGGATCG ACCCGACCAC CGGCCGAGTC
CGCCGGTTCG CCTACCCGCC GCAGCTGCTG GTGGTGGACG GCGGTGCGCC GCAGGTCAAT
GCGGCCGCCA CCGTGCTGTC CGAGCTGGGC ATCGTGGACA TCACCGTCTG CGGCCTGGCC
AAGCGGCTGG AGGAGGTCTG GTTGCCGTTC CAGGCCGACC CGGTCATCTT CCCGCGCACC
AGCGAGGCCC TCTACCTGCT GCAACGGCTG CGCGACGAGG CCCACCGGTT CGCCATCACC
TACCACCGGG CCAAGCGCTC CAAGTCGATG ACGGTGTCCG CGCTGGACAA TGTCCCCGGA
CTGGGTGAGG TGCGCCGCAA GGCGCTCGTG CGACATTTCG GGTCGGTCGC CGCGCTGCGC
CGGGCCGACG TCGAGCAGAT CCTGCAGGTG CCCGGGGTGG GCCGGCGCAC CGCGGAGGCG
GTCGTCGCCG CCCTCGCCGG TTCCGGTGGC GCCGGAACCG ATACCGTGAT CAGTTCGTGA
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| Protein sequence | MPDPAVYRPA PGTIPESPGV YKFRDPKGRV IYVGKAKSLR QRLNSYFADI AALHPRTRQM
VTSAGSVEWT VVSTEVEALQ LEYNWIKEFD PRFNVRYRDD KSYPFLAVTV GEEYPRLQVM
RGAHRKGVRY FGPYAHAWAI RETLDLLLRV FPARTCSAGV FRRSAQIGRP CLLGYIGKCS
APCVGRVSAQ EHREIVEGFC DFMAGKADPL IRRLEKQMTA AAADLDFERA ARLRDDLSAV
RRAVEKQAVV FGDGTDADVI GIAADELLAS VQLFHVRDGR VRGERGWIVD VDADVDADGN
DRDGLPLLVE NFLLQFYGDL AADGDAGGPT SSVPREILVP VLPSQDAGTH DEMVDWLSAL
RGSRVSLRVA QRGDKRALAE TVARNAQEAL TRHRLKRAGD LTARSAALSE LGETLGMDVA
PLRIECIDIS HVQGTDVVAS LVVFEDGLAK RSDYRRFAIR DKPGDDVASI AEVVRRRFTH
QARAEAGERA EADSTPAPTP TPTPAGSGVP AGIDPTTGRV RRFAYPPQLL VVDGGAPQVN
AAATVLSELG IVDITVCGLA KRLEEVWLPF QADPVIFPRT SEALYLLQRL RDEAHRFAIT
YHRAKRSKSM TVSALDNVPG LGEVRRKALV RHFGSVAALR RADVEQILQV PGVGRRTAEA
VVAALAGSGG AGTDTVISS
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