| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Namu_2787 |
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| Symbol | |
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| ID | 8448400 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nakamurella multipartita DSM 44233 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013235 |
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| Strand | + |
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| Start bp | 3054838 |
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| End bp | 3055530 |
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| Gene Length | 693 bp |
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| Protein Length | 230 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 645041880 |
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| Product | HAD-superfamily hydrolase, subfamily IA, variant 3 |
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| Protein accession | YP_003202122 |
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| Protein GI | 258652966 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0637] Predicted phosphatase/phosphohexomutase |
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| TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.00137861 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.0000132599 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGCGCCC CCGACGGTCC GCCGCTGCGC GCGGTGCTGT TCGACATGGA CGGCACCGTG
GTCGATTCCG AGCACCTGTG GGCGCAGGCG ATGACGCAGA TCGCGGCCGA GCTGGGCGGC
ACCCTGTCGG CGGAGGTGCT GGCCCGGACC ACCGGCCTGT CGGTGCCGGC GTCGGTGGAC
CTGATGTTGA CCGAACTCGG CTCCGACCTG GCCCATCACG AGGCGACCGA GCAGTTGCTG
GCCCGCACGG CCGAGGTGTT CGCGGCCGAG CTGATGTGGC AGCCGGGCGC CCAGGAACTG
ATCGACGCGC TGCGCGCCGA GGGGGTGGCC ACCGCGCTGG TCACCAACTC GCCGCGGGTC
GTCGTCGACG TCGCCCTGCA GCGGCTGGGT GGGCACCGGT TCGACCTGTC GGTCTGCGGC
GACGAGGTGG CGGTGCACAA GCCCGACCCG GAGCCCTACC TGACCGCGAT GCGAGGGCTC
CAGCGGCCGG CCGCGCAGTG CCTGGCGGTG GAGGATTCCC CGTCCGGCAC CGCGGCCGCG
GTGACCGCCG GAATCCCGGT GCTGGTGGTG CCGTCCGAGG TGGACGTCCC CGAAGGCCCG
GGCCGGGTGT TCGCCGCCTC GCTGCTGGAC GCCACCGTCG ACGAGCTGCG GCATCTGCAT
CACGCGTTCC ACCGGAGTCG TTTCGGGGCA TAG
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| Protein sequence | MSAPDGPPLR AVLFDMDGTV VDSEHLWAQA MTQIAAELGG TLSAEVLART TGLSVPASVD
LMLTELGSDL AHHEATEQLL ARTAEVFAAE LMWQPGAQEL IDALRAEGVA TALVTNSPRV
VVDVALQRLG GHRFDLSVCG DEVAVHKPDP EPYLTAMRGL QRPAAQCLAV EDSPSGTAAA
VTAGIPVLVV PSEVDVPEGP GRVFAASLLD ATVDELRHLH HAFHRSRFGA
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