Gene Namu_2487 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNamu_2487 
Symbol 
ID8448098 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNakamurella multipartita DSM 44233 
KingdomBacteria 
Replicon accessionNC_013235 
Strand
Start bp2744101 
End bp2745210 
Gene Length1110 bp 
Protein Length369 aa 
Translation table11 
GC content70% 
IMG OID645041599 
Productphenylacetate-CoA oxygenase/reductase, PaaK subunit 
Protein accessionYP_003201843 
Protein GI258652687 
COG category[C] Energy production and conversion 
COG ID[COG1018] Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 
TIGRFAM ID[TIGR02160] phenylacetate-CoA oxygenase/reductase, PaaK subunit 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.000141396 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.0209402 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCATCA CCCCCGAGAT CGCCGAACCC GCCGCCGGCC GCCGGCACGC CGTCTTCCAC 
CCGCTGCGGG TCGCTGCCGT CGAGCGGCTG ACCGAGGACG CGGTGGCCGT TACCTTCGAG
GTGCCCGACG AGTTGCGGGA CGAGTTCCGG TTCAACCCGG GTCAGCACCT GTCGGTCAAG
GCCGCCGCGC TCGGCGACGA CGTGCGGCGC AACTACTCGA TCTGCGCACC GGCCACCGGC
GGTCCGCTCC GGATCGGCGT CAAACGCATT CCCGACGGGG TGTTCTCGGC CTTCGTCGCG
GACCGGCTCC AGCCCGGCGA CACACTGGAG GTGATGACGC CGACCGGAAC GTTCTCCACC
CGGCTCGATC CCCACCAGGC CAAGCGCTAC GTCGCGGTGG CCGCCGGCTC CGGCATCACC
CCGGTGCTGT CCATCCTGGC CACCGCGCTG GAGGTGGAGC CGGACAGCAC GGCCGCGCTG
ATCTACGTCA ACCGGCGCAC GTCCACGATC ATGTTCCTGG AGGAACTGGA AGACCTGAAA
AACCGGTTCC CGGCCCGGTT CCAGTTGATC CATGTGCTCG GCCACGAGCT GACCGAGGTC
GACATGCTCT CGGGGCGGCT CGATGTCGAC CGGTTCGAGC GCATCCTGGA CACCATCCTG
CCGGTGGCGG ACGTCGACGA CTGGTTCCTG TGCGGACCGC TGGCCATGAC CGACACCGTC
CGTGGCGTGC TGCTGGATCG CGGCGTGCCC GGTGACCACG TGCACCGCGA GCTGTTCCAC
GTCGGCGCCC CGCCCCGGCG CCGGATCCGG CCGGTCGACG TCCCGGCCAG CGGGGCCCGG
GTCACCGTCA TCCTGGACGG CCGTTCGGTC GAGATGACCC TGCCCCCGGA CGGCGACTCG
ATCCTGGACG CGACCCTGCA GGTGCGCTCC GATGCCCCGT TCGCCTGCAA GAACGCGGTG
TGCGGCACCT GCCGCGCCCG GGTGACCGAG GGGAAGGTGG AGATGGACGG CAACTACGCC
CTCGAACCCG ACGAGCTGGC CCGCGGTTTC GTCCTGACCT GCCAGGCGCA CCCGGTCACC
GACCGCGTCG TCGTGGACTT CGACCAGTGA
 
Protein sequence
MAITPEIAEP AAGRRHAVFH PLRVAAVERL TEDAVAVTFE VPDELRDEFR FNPGQHLSVK 
AAALGDDVRR NYSICAPATG GPLRIGVKRI PDGVFSAFVA DRLQPGDTLE VMTPTGTFST
RLDPHQAKRY VAVAAGSGIT PVLSILATAL EVEPDSTAAL IYVNRRTSTI MFLEELEDLK
NRFPARFQLI HVLGHELTEV DMLSGRLDVD RFERILDTIL PVADVDDWFL CGPLAMTDTV
RGVLLDRGVP GDHVHRELFH VGAPPRRRIR PVDVPASGAR VTVILDGRSV EMTLPPDGDS
ILDATLQVRS DAPFACKNAV CGTCRARVTE GKVEMDGNYA LEPDELARGF VLTCQAHPVT
DRVVVDFDQ