Gene Namu_2392 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNamu_2392 
Symbol 
ID8448003 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNakamurella multipartita DSM 44233 
KingdomBacteria 
Replicon accessionNC_013235 
Strand
Start bp2637023 
End bp2639131 
Gene Length2109 bp 
Protein Length702 aa 
Translation table11 
GC content75% 
IMG OID645041511 
Productserine/threonine protein kinase with PASTA sensor(s) 
Protein accessionYP_003201755 
Protein GI258652599 
COG category[K] Transcription
[L] Replication, recombination and repair
[R] General function prediction only
[T] Signal transduction mechanisms 
COG ID[COG0515] Serine/threonine protein kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.00165759 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000838349 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGACGGGCC GGTACGAGAT CGGGGACGAG GTCGGGCGGG GCGCCACGTC GGTGGTGCAC 
CGCGGTCGTG ACCTGCGCCT GCAGCGCGAC GTCGCGATCA AGGTGCTGCG AGCCGATCGC
CACCAGGACC CGGCGTTCCG GGCCCGGCTC CGGCAGCAGG CGGCCGCGGC CGCCGTGCTC
AATCACCCCG GGATCGTCGC GGTCTACGAC ACCGGCGAGC TGCCACCCGA GGACGAGCAC
GCCGGCGACC CGTTCATCGT CACCGAATGG GTGGACGGCC GGACCCTGCG CGCGGAACTG
GACGCCGACG GTCCCCCGCC GATCGACCGG ACCGTCGCCC TGGTCTCGGA AGTCTGCCGC
GCCCTTGACT TTTCGCACAA GCAGGGCATC CTGCACCGGG CGGTACGCGC AGAGAACGTG
ATGCTGGCGC GCGACGGCGA CCGGGAGTCG GTCAAGGTCA TGGACTTCGG CATGCCGACC
ACCTTCGCGC CGGCCGGGAA CATGCCCGCC GGCCGCCGCG CCGGGCCGGC CGGGGCGGCC
CCGGATCTGC CCGCCTGGGC GGCCGGATCA CTGGCCCCGG AACAGGTTCG GGGCGAACCG
CTCGATGCCC GCACCGATGT GTACGGCGCC GGCTGCCTGC TCTACGAACT GCTCACCGGG
ACGGTCCCGT TCACCGGCGA CGACGCGGTC GCGGTCGCGG TGCGGGTCGC CGGGGAACCG
GTCCGGCCGC CCGGTGAGCT GGCGCCGTCG GTGCCGGCCG AGCTGGACGC GGTGGTGCTG
ACCGCGCTGG CCAAGGACCC GCTGGACCGC TACCAGTCGG CCGCCGATCT GCGGGCCGAC
CTGGCCCGGG TCCGGGTCGG GACCCCGGCC CTGGCCGCCG TCGGCGCGGC CCGGCCCGGG
CCGGTCGGTT CGCCGCCACT GCTCGCCCCG CCGACCCGCA ACCGGCGCGT GGACGAGGGC
GAACCGGCCC CGCCACCCCG CTCCCGTCGG GTCGCCGCCG CGGTCGGGTT CGGCATCGTC
AGCGCCCTGG CCCTGGCCGC CGCGATCTGG TTGACCATGA GCGTGCTCGG CACCCCGCCG
CCGGCCCGGC CGATCGCCGT GCCCGACCTG TCCGGGATGC CGCTGGATCA GGCCCGGCAG
GTCCTGGCCG ACAAGGGACT GACCGCCGGC GCGGTGACCC AGGCCGATTC GAGTGCCGCC
GACGTCGGAA AGGTGGTGCA GCAGCGGCCT TCCGGGCTGA CCCAGGTGGT CGGTGGGTCA
CCGGTGGCGC TGGTCGTCGG CCGCGGCGTC AGCTCGGTCG CGCTGCCCGA CCTGGCCGGG
TTGACCCCGG ATCAGGCCCG GTCCGCCCTG TCCGCGGTGG GCCTGACCTA CGCCGAGCAG
CAGCAGCCGT CCGCCGACCC GGACCGAGGC AAGGTGCTGG CCCAGTCCCC CGCCGCGCAC
CTGGCGGCCC CGCCGGGCAG CACGGTGATC GTCACCGTCG GCACCGGCCT GACCCTGGTC
ACCGTGCCCG ACGGCATCGT CGGGGTCGGC GTGGAGGAGG CGACCGCTAT CCTGACCGGC
GCCGGCCTGA GCGCGGTCGG CGTCGAACAG GACGGCGTCC AGCCCCGCGG GGTCGTCATC
GGCACCGACT CGGCGCCCGG GCAGCGGGTG CCCGAAGGCA GCCCGATCAC CTTGAACTAC
TCGAACAACG CGCTGATGGT GATGCCGTCG CTGGTCGGCC GGGGTCGGGA CGCCGCCGCC
GGACTGCTGC AGGACCAGGG CTGGGCCGGT GACGCCAGCA CGATCGGGAC GACCTCCGCG
CCGGCCCCGT CGCCGAACCT GATCGGCGCG ATCGTCAGCC AACAGCCGGC CGCCGGGTCC
GTGGTGCCCA AGCTCGGCAC ACCGGTGTCC GTGGGCGTCG GGGTCAAGCA GATCACCATG
CCGGCCCTGG TCGGGCGCAC CCGGGCCGAG GCGCAGAACC TGCTCCGGGC GGCCGGCGCC
ACCGCGGTCA CCGTCACCGA CGCCGGCCCG CCACCCCGGG GCAAGAGCGG CCGAGTGGCC
AGCCAGTCGG TGCCCGCGGG AACCGCGATC ACCGCCGACA CCGCGGTGGT GATCGCGATC
TACGGCTGA
 
Protein sequence
MTGRYEIGDE VGRGATSVVH RGRDLRLQRD VAIKVLRADR HQDPAFRARL RQQAAAAAVL 
NHPGIVAVYD TGELPPEDEH AGDPFIVTEW VDGRTLRAEL DADGPPPIDR TVALVSEVCR
ALDFSHKQGI LHRAVRAENV MLARDGDRES VKVMDFGMPT TFAPAGNMPA GRRAGPAGAA
PDLPAWAAGS LAPEQVRGEP LDARTDVYGA GCLLYELLTG TVPFTGDDAV AVAVRVAGEP
VRPPGELAPS VPAELDAVVL TALAKDPLDR YQSAADLRAD LARVRVGTPA LAAVGAARPG
PVGSPPLLAP PTRNRRVDEG EPAPPPRSRR VAAAVGFGIV SALALAAAIW LTMSVLGTPP
PARPIAVPDL SGMPLDQARQ VLADKGLTAG AVTQADSSAA DVGKVVQQRP SGLTQVVGGS
PVALVVGRGV SSVALPDLAG LTPDQARSAL SAVGLTYAEQ QQPSADPDRG KVLAQSPAAH
LAAPPGSTVI VTVGTGLTLV TVPDGIVGVG VEEATAILTG AGLSAVGVEQ DGVQPRGVVI
GTDSAPGQRV PEGSPITLNY SNNALMVMPS LVGRGRDAAA GLLQDQGWAG DASTIGTTSA
PAPSPNLIGA IVSQQPAAGS VVPKLGTPVS VGVGVKQITM PALVGRTRAE AQNLLRAAGA
TAVTVTDAGP PPRGKSGRVA SQSVPAGTAI TADTAVVIAI YG