Gene Namu_2328 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNamu_2328 
Symbol 
ID8447939 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNakamurella multipartita DSM 44233 
KingdomBacteria 
Replicon accessionNC_013235 
Strand
Start bp2571276 
End bp2572046 
Gene Length771 bp 
Protein Length256 aa 
Translation table11 
GC content72% 
IMG OID645041449 
ProductTransglycosylase domain protein 
Protein accessionYP_003201693 
Protein GI258652537 
COG category 
COG ID 
TIGRFAM ID[TIGR01168] Gram-positive signal peptide, YSIRK family 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.00483486 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000113604 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACCCGTC GTACCGTCGC GCGCCATCGC AAGCCTTCCA AGGCCCGCAC CTTCGCCCTC 
CGTGGTGCCA CCGTCGGCGT GGTCGCCGGC GCTGCCGCCC TGGGTCTGGG CGCCGGCACC
GCCTCCGCCG CCCCCGACTC GACCTGGGAC GCCGTCGCGC AGTGCGAGAG CAGCGGCAAC
TGGTCCATCA ACACCGGCAA CGGCTACTAC GGCGGCCTGC AGTTCTCGCA GTCCACCTGG
AACGCCTTCG GCGGCCAGGA GTACGCCGCT CGCGCCGACC TGGCCACCAA GGAGCAGCAG
ATCGCCATCG CCGAGAAGAC GCTGGCCGGT CAGGGCTGGG GCGCCTGGGC CTGCGCCTAC
GCCGGCGGCG GCGAGGGTGC CACCCAGCGC TCGGTGAGCG GTTCGTCCTC CTCGTCCGAC
AGCTCGTCCG ACAGCTCCTC CAGCAGCTCG TCCGGCAGCT CCGCCAGCAG CTCGTCCTCG
GACAGCAGCT CCTCGCGCAG CAGCCGCAGC CAGAACGACA CCCAGGAGTC CTCGCGGGGC
AGCCACCGCT CCTGGAACCA GGACAGCGAC TCGTCCGGCT CCAGCAGCTC GTCGGTGACC
GCCGGGAGCG CGGCCGACGG CACCTACACC GTGGCCTCGG GCGACACCCT CTACAAGATC
GCCGCCGCCA ACGGCGTCTC CGGTGGCTGG GAGGCCGTGT ACCAGGCCAA CTCCGACATC
ATCCCGGACC CGAACCTGAT CTACCCGGGC CAGGTCCTGC GCATCCCGTG A
 
Protein sequence
MTRRTVARHR KPSKARTFAL RGATVGVVAG AAALGLGAGT ASAAPDSTWD AVAQCESSGN 
WSINTGNGYY GGLQFSQSTW NAFGGQEYAA RADLATKEQQ IAIAEKTLAG QGWGAWACAY
AGGGEGATQR SVSGSSSSSD SSSDSSSSSS SGSSASSSSS DSSSSRSSRS QNDTQESSRG
SHRSWNQDSD SSGSSSSSVT AGSAADGTYT VASGDTLYKI AAANGVSGGW EAVYQANSDI
IPDPNLIYPG QVLRIP