Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Namu_2328 |
Symbol | |
ID | 8447939 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nakamurella multipartita DSM 44233 |
Kingdom | Bacteria |
Replicon accession | NC_013235 |
Strand | + |
Start bp | 2571276 |
End bp | 2572046 |
Gene Length | 771 bp |
Protein Length | 256 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 645041449 |
Product | Transglycosylase domain protein |
Protein accession | YP_003201693 |
Protein GI | 258652537 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR01168] Gram-positive signal peptide, YSIRK family |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.00483486 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.000113604 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGACCCGTC GTACCGTCGC GCGCCATCGC AAGCCTTCCA AGGCCCGCAC CTTCGCCCTC CGTGGTGCCA CCGTCGGCGT GGTCGCCGGC GCTGCCGCCC TGGGTCTGGG CGCCGGCACC GCCTCCGCCG CCCCCGACTC GACCTGGGAC GCCGTCGCGC AGTGCGAGAG CAGCGGCAAC TGGTCCATCA ACACCGGCAA CGGCTACTAC GGCGGCCTGC AGTTCTCGCA GTCCACCTGG AACGCCTTCG GCGGCCAGGA GTACGCCGCT CGCGCCGACC TGGCCACCAA GGAGCAGCAG ATCGCCATCG CCGAGAAGAC GCTGGCCGGT CAGGGCTGGG GCGCCTGGGC CTGCGCCTAC GCCGGCGGCG GCGAGGGTGC CACCCAGCGC TCGGTGAGCG GTTCGTCCTC CTCGTCCGAC AGCTCGTCCG ACAGCTCCTC CAGCAGCTCG TCCGGCAGCT CCGCCAGCAG CTCGTCCTCG GACAGCAGCT CCTCGCGCAG CAGCCGCAGC CAGAACGACA CCCAGGAGTC CTCGCGGGGC AGCCACCGCT CCTGGAACCA GGACAGCGAC TCGTCCGGCT CCAGCAGCTC GTCGGTGACC GCCGGGAGCG CGGCCGACGG CACCTACACC GTGGCCTCGG GCGACACCCT CTACAAGATC GCCGCCGCCA ACGGCGTCTC CGGTGGCTGG GAGGCCGTGT ACCAGGCCAA CTCCGACATC ATCCCGGACC CGAACCTGAT CTACCCGGGC CAGGTCCTGC GCATCCCGTG A
|
Protein sequence | MTRRTVARHR KPSKARTFAL RGATVGVVAG AAALGLGAGT ASAAPDSTWD AVAQCESSGN WSINTGNGYY GGLQFSQSTW NAFGGQEYAA RADLATKEQQ IAIAEKTLAG QGWGAWACAY AGGGEGATQR SVSGSSSSSD SSSDSSSSSS SGSSASSSSS DSSSSRSSRS QNDTQESSRG SHRSWNQDSD SSGSSSSSVT AGSAADGTYT VASGDTLYKI AAANGVSGGW EAVYQANSDI IPDPNLIYPG QVLRIP
|
| |