| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Namu_2279 |
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| Symbol | |
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| ID | 8447890 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nakamurella multipartita DSM 44233 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013235 |
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| Strand | + |
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| Start bp | 2514180 |
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| End bp | 2515487 |
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| Gene Length | 1308 bp |
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| Protein Length | 435 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 645041401 |
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| Product | cysteine desulfurase, SufS subfamily |
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| Protein accession | YP_003201645 |
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| Protein GI | 258652489 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0520] Selenocysteine lyase |
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| TIGRFAM ID | [TIGR01979] cysteine desulfurases, SufS subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.000248982 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.0516835 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGCAGG AGGTGATCAC GGTGACTCCC GAGCAGCTGA CGGCCGCGGA CATCGAGCGG
ATCCGCGCCG ACTTCCCGAT CCTGGAGCGC ACGGTCCGGG ACGGAAAGCC GCTGGTGTAC
CTGGACTCCG GCGCCACCTC GCAACGCCCG ATCGGCGTCA TCGACGCCGA GCAGGAGTAC
GTGACCGGCC ACAACGCCGC GGTCCACCGG GGCGCGCACC AGCTGGCCGA GGAGGCGACC
GACTTCTACG AGTCGGCCCG GGAGCGGATC GCGGCGTTCA TCGGGGCGCC GCGCACCGAC
GAGGTGATCT TCACCAAGAA CGCCACCGAG TCGCTCAACC TGGTCGCCTA CTCGCTGGGC
AACGCCACCT TCTCGCAGGA TCCGGCCGCT CGCCGGTTCC GGCTGGGGCC GGGTGACGAG
GTCGTGGTCA CCGAGATGGA GCACCACGCG AATCTGGTGC CGTGGCAGGA ACTGTGCCGG
CGCACCGGGG CCACCCTGCG CTGGTTCTCG GTGACCGAGG ACTTCCGGCT CGACCTGTCG
AACCTGGACG AGGTGATCAC GCCCCGGACC AAGGTCCTGG CCTTCACCCA CCAGTCCAAC
GTCCTGGGCA CCATTAACCC GGTCGACGTG CTGGTCGCCG CCGCGCAGCG GGTCGGCGCG
CTGACCGTGC TCGACGCGTG CCAGTCGGTG CCGCACCAGA GCGTCGACCT GGCCGCGCTG
GACGTCGATT TCGCCGCCTT CTCCGGGCAC AAGATGTTCG GCCCGAGCGG GGTCGGCGTG
CTCTACGGCC GCTACGAGCT GCTGGCCGCC ATGCCGCCGT TCCTGACCGG CGGATCGATG
ATCGAGCAGG TCTTCATCGA CCACTCGACC TACGCCGCAC CGCCGGCCCG GTTCGAGGCC
GGTGTGCCGA TGACCTCGCA GGCGGTGGCC CTGGGCGCGG CCGTCGACTA CCTGCGCGAC
GTCGGCATGA AGGTGGTGGC CGACCACGAG GCCGAGCTGA CCGGCTATGC CTTGCAGGAG
CTCTCGGCCA TCGACGGGGT CCGGATCATC GGTCCGTCGA GCACCGTCGA CCGCGGGTCC
GCGGTCTCCT TCGTCGTGGA CGGGGTGCAC GCGCACGACG TCGGCCAGAT CCTGGACGAT
GCCGGCGTGC AGGTGCGGGT GGGTCACCAC TGCGCCTGGC CGCTGCACCG CCGGTTCCGG
GTCGCCGCCA CCGTGCGCGC CTCGTTCGCG CTGTACAACA CCGCCGCCGA GGTCGACGCG
TTGACCGCGG GAGTGCGCTC GGCCCAACGA TTCTTCGGGG TGAGCTGA
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| Protein sequence | MAQEVITVTP EQLTAADIER IRADFPILER TVRDGKPLVY LDSGATSQRP IGVIDAEQEY
VTGHNAAVHR GAHQLAEEAT DFYESARERI AAFIGAPRTD EVIFTKNATE SLNLVAYSLG
NATFSQDPAA RRFRLGPGDE VVVTEMEHHA NLVPWQELCR RTGATLRWFS VTEDFRLDLS
NLDEVITPRT KVLAFTHQSN VLGTINPVDV LVAAAQRVGA LTVLDACQSV PHQSVDLAAL
DVDFAAFSGH KMFGPSGVGV LYGRYELLAA MPPFLTGGSM IEQVFIDHST YAAPPARFEA
GVPMTSQAVA LGAAVDYLRD VGMKVVADHE AELTGYALQE LSAIDGVRII GPSSTVDRGS
AVSFVVDGVH AHDVGQILDD AGVQVRVGHH CAWPLHRRFR VAATVRASFA LYNTAAEVDA
LTAGVRSAQR FFGVS
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