| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Namu_2268 |
|---|
| Symbol | |
|---|
| ID | 8447879 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nakamurella multipartita DSM 44233 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013235 |
|---|
| Strand | - |
|---|
| Start bp | 2503427 |
|---|
| End bp | 2504440 |
|---|
| Gene Length | 1014 bp |
|---|
| Protein Length | 337 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 645041390 |
|---|
| Product | cytochrome oxidase assembly |
|---|
| Protein accession | YP_003201634 |
|---|
| Protein GI | 258652478 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG1612] Uncharacterized protein required for cytochrome oxidase assembly |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.00686495 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.0860504 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGACGT CCGCGAGCAC CGGCGAGCCC GGTTCCCGAC CCACCGATCC CTGGTGGCGC
CGGGCCCCCT CGCATCAGCT GCAGAAGGCG TTCGCCTGGG CGGCGGTGGT GACCAATGGC
CTGATCGCGG TCACCGGGGC CACGGTCCGG GTCACCGGGT CCGGCCTGGG TTGCCCGACC
TGGCCGGAAT GCCACCCGGG CTCGCTCGTC CCGGTGAGCC GGGCCGACTT GTCCCCCATC
CACCAGGCCA TCGAGTTCGG CAACCGCACG CTGACCGGCC TGGTGCTGGT CGCCTCGCTG
GGCCTGTTCG TGGTGCTCTG GCGGGCCCGC CCGCAGCGGC CCGGACTGGT CAAGCTGTCG
GCGGTGCTGC CCGCCGGGGT GCTGTTCCAG GCGCTGTGGG GCGGACTGAC GGTGCTCACC
GGGCTGGCCT GGTGGACCGT CGCCCCGCAC ATGCTGGTCT CGCTGGTCCT GCTGTTCGTG
GCCATCGTGG TGCTGGTCCG GCTGGACGAG ACCGACGAGC CGCCGGTGCC CGTGGTTCCC
CGCCCGCTGC AGCTGCTGAC CTGGGCGACC GTCGTCGTGC TCGGGGCGCT GTGCGTGGCC
GGCACCCTGG TCACCGCGGC CGGACCGCAC GGGGGTGACG ACGCCACGCC CCGGCTGGAT
CTGCCGGTGC GGGCGCTGGC CCAGGTGCAC GCCGACCTGA TGTTCGCCTA TCTGGGCCTG
CTGGTCGCGA TGACCGTCGG CTACCTGGCC GTGCGGGCCC CCCGCGCGCT GATGGTGCGC
GCGTACGTGC TGATCGGGGT CACCGCCGGG CAGGGCCTGA TCGGACTCGT GCAGTACGCC
ACCGGGGTGC CCGAGGTGCT GGTGGTAGCG CACGTGCTCG GCGCCACCCT GCTGGTCGCC
GCGGCCGCCG CGGTGGCGCT GGCGACCCGG GACCGGGGCG TTCACCGACC CAGCACCGAG
GCCACCGCGG AGGCGTCCGA CAGCGTGCGC AGCGCGGCTT CCTCGACCGG CTGA
|
|---|
| Protein sequence | MTTSASTGEP GSRPTDPWWR RAPSHQLQKA FAWAAVVTNG LIAVTGATVR VTGSGLGCPT
WPECHPGSLV PVSRADLSPI HQAIEFGNRT LTGLVLVASL GLFVVLWRAR PQRPGLVKLS
AVLPAGVLFQ ALWGGLTVLT GLAWWTVAPH MLVSLVLLFV AIVVLVRLDE TDEPPVPVVP
RPLQLLTWAT VVVLGALCVA GTLVTAAGPH GGDDATPRLD LPVRALAQVH ADLMFAYLGL
LVAMTVGYLA VRAPRALMVR AYVLIGVTAG QGLIGLVQYA TGVPEVLVVA HVLGATLLVA
AAAAVALATR DRGVHRPSTE ATAEASDSVR SAASSTG
|
|---|
| |