| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Namu_2196 |
|---|
| Symbol | |
|---|
| ID | 8447807 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nakamurella multipartita DSM 44233 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013235 |
|---|
| Strand | - |
|---|
| Start bp | 2424730 |
|---|
| End bp | 2425272 |
|---|
| Gene Length | 543 bp |
|---|
| Protein Length | 180 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 645041318 |
|---|
| Product | PEBP family protein |
|---|
| Protein accession | YP_003201562 |
|---|
| Protein GI | 258652406 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1881] Phospholipid-binding protein |
|---|
| TIGRFAM ID | [TIGR00481] Raf kinase inhibitor-like protein, YbhB/YbcL family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.00567412 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.00102935 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | GTGAGCCTGG ATCGACCCGT CGCCCCGGAT CCGTACGCCC TGCTGCCGGA GGTGGGCTCG
TTCACCGTCG CCAGCCCGGA CATCGCCGAC GGCCAGGAGG TCGGGCCGCA GTTCCGGTAC
GGGCCGGACG CGCCGAGCGG CGAGAACCTC TCGCCCGCCC TGCGCTGGTC GGGCTTTCCG
GCCGATACCC AGTCGTTCGT GGTGAGCTGC TTCGATCCGG ACGCGCCGAC CCCGGCGGGC
TTTTGGCACT GGACCCTGGT CGACATCCCG GCCTCGGTGA CCGAGCTGGC GCGCGGCGCC
GGCAGCGCCG GCGGCCCGCT GCCCGACGGA GCGTTCCACG TGCGCAACGA CTTCGGCTCC
GCCGGCTACG ACGGGCCGGC CCCGCCGCCG GGTGACCAGG TGCACCGCTA CTTCTTCGTC
GTGCACGCGG TCGACGTCCC CACGCTCGGG CCGGACGCGA GCGCGAGCCC CACCGTGGTG
GCGTTCAACC TGGTCTTTCA CACGCTGGCC CGGGCCGTCA TCACCCCCAC GTTCGCCTAC
TGA
|
|---|
| Protein sequence | MSLDRPVAPD PYALLPEVGS FTVASPDIAD GQEVGPQFRY GPDAPSGENL SPALRWSGFP
ADTQSFVVSC FDPDAPTPAG FWHWTLVDIP ASVTELARGA GSAGGPLPDG AFHVRNDFGS
AGYDGPAPPP GDQVHRYFFV VHAVDVPTLG PDASASPTVV AFNLVFHTLA RAVITPTFAY
|
|---|
| |