| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Namu_2185 |
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| Symbol | ispG |
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| ID | 8447796 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nakamurella multipartita DSM 44233 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013235 |
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| Strand | + |
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| Start bp | 2412333 |
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| End bp | 2413517 |
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| Gene Length | 1185 bp |
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| Protein Length | 394 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 645041307 |
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| Product | 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase |
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| Protein accession | YP_003201551 |
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| Protein GI | 258652395 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0821] Enzyme involved in the deoxyxylulose pathway of isoprenoid biosynthesis |
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| TIGRFAM ID | [TIGR00612] 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.0158737 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.000478047 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACCTCCA CACAGGCGAC TCCGGTGGGC CTCGGCCTGC CGAGCATGCC CGCCGACCGG
GCCGTCCCGG TCCTGGCGCC GCGTCGCACG ACCCGGCAGC TCAACGTCGG CGGGGTCGGG
GTGGGCAGCG ACCACCCGGT GTCGGTGCAG TCGATGACCA CGACCGTGAC GGCCGACATC
AATGCCACCC TGCAGCAGAT CGCCGAGTTG ACCGCGTCCG GCTGCCAGAT CGTGCGGGTG
GCCGTGCCCA GCACCGACGA CGCCGCGGCG CTGCCGATCA TTGCCCGCAA GTCGCAGATC
CCGGTGATCG CCGACATCCA TTTCCAGCCC AAGTACGTCT TCGCGGCGAT CGACGCCGGC
TGCGCCGCGG TGCGGGTCAA CCCGGGCAAC ATCAAGGCGT TCGACGACAA GGTCGGCGAG
ATCGCCAGGG CGGCCAAGGA CGCCGGCACG CCGATCCGGA TCGGGGTCAA CGCCGGATCC
TTGGACAAGC GTTTGCTGGC TAAGTACGGC AAGGCGACCC CGGAGGCGCT GGTCGAGTCG
GCGTTGTGGG AGTGCTCGCT GTTCGAGGAG CACGACTTCC GCGACATCAA GATCTCGGTC
AAGCACAACG ACCCGGTGAT CATGGTCCGG GCCTACGAGC TGTTGGCCCA GCAGTGTGAC
TACCCGTTGC ATCTCGGGGT CACCGAGGCC GGGCCGTCGT TCCAGGGGAC CATCAAGTCG
GCCGTGGCTT TTGGTGCGCT GCTGTCCCAG GGCATCGGTG ACACCATCCG GGTGTCCTTG
TCGGCCCCGC CGGCCGAGGA GGTCAAGGTC GGGTTGCAGA TCCTGGAGTC GCTCAACCTG
CGTGAACGGG GCCTGGAGAT CGTGTCCTGC CCGTCCTGCG GGCGGGCTCA GGTGGATGTC
TACACGCTGG CCGAGCAGGT CACGGCCGGC TTGGAGGGCA TGGATGTGCC GTTGCGTGTG
GCCGTGATGG GTTGCGTGGT CAACGGTCCG GGGGAGGCCC GCGAGGCCGA TCTCGGGGTG
GCCTCGGGCA ACGGCAAGGG TCAGATCTTC GTCAAGGGCG AGGTCATCAA GACCGTGCCC
GAGTCGCAGA TCGTGGAGAC GCTGATCGAG GAGGCCATGC GCATCGCCGA CGACCTGCGC
GCTGCCGGCG TGGCCAGCGG TGCACCCACG GTCGTCAACG TCTGA
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| Protein sequence | MTSTQATPVG LGLPSMPADR AVPVLAPRRT TRQLNVGGVG VGSDHPVSVQ SMTTTVTADI
NATLQQIAEL TASGCQIVRV AVPSTDDAAA LPIIARKSQI PVIADIHFQP KYVFAAIDAG
CAAVRVNPGN IKAFDDKVGE IARAAKDAGT PIRIGVNAGS LDKRLLAKYG KATPEALVES
ALWECSLFEE HDFRDIKISV KHNDPVIMVR AYELLAQQCD YPLHLGVTEA GPSFQGTIKS
AVAFGALLSQ GIGDTIRVSL SAPPAEEVKV GLQILESLNL RERGLEIVSC PSCGRAQVDV
YTLAEQVTAG LEGMDVPLRV AVMGCVVNGP GEAREADLGV ASGNGKGQIF VKGEVIKTVP
ESQIVETLIE EAMRIADDLR AAGVASGAPT VVNV
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