| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Namu_2183 |
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| Symbol | |
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| ID | 8447794 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nakamurella multipartita DSM 44233 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013235 |
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| Strand | + |
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| Start bp | 2409828 |
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| End bp | 2410997 |
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| Gene Length | 1170 bp |
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| Protein Length | 389 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 645041305 |
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| Product | 1-deoxy-D-xylulose 5-phosphate reductoisomerase |
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| Protein accession | YP_003201549 |
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| Protein GI | 258652393 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0743] 1-deoxy-D-xylulose 5-phosphate reductoisomerase |
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| TIGRFAM ID | [TIGR00243] 1-deoxy-D-xylulose 5-phosphate reductoisomerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.00750593 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.00115394 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGATTCTGC TCGGGTCCAC CGGCTCGATC GGCACTCAGG CCCTGGACGT CATCGCCGCC
CATCCTGATC GGTTCGAGGT GGTCGGGCTG GCGGCCGGCG GGTCCAACCC GGACCTGTTC
GCCGCTCAGG CGGCCGCCCA CCCGCACGCC GCGCTGGCCA GCGCGACCCC GGCGCCGCCG
GTCGACGGCC GCCCGATGCT GATCGGTGCC CGCGCGGCCA CTGAGCTGGT GCAGACCACC
GAGGCCGACG TGGTCCTCAA CGGCATCACC GGCTCCATCG GGCTGGAACC CACCCTGGCC
GCGCTGACCG CCGGCCGCAC CCTGGCCCTG GCCAACAAGG AATCGTTGGT CGCCGGCGGG
TCACTGGTCA CCCGGGCCGC TGCGCCCGGG CAGATCGTGC CGGTCGACTC CGAGCACAGC
GCGTTGGCCC AATGCCTGCG GTCCGGTGCG GCCGGCGAGG TCGCTCGGCT GGTGGTGACC
GCCTCGGGCG GCCCGTTCCG GGGATGGACG CGGGCGCAGG TCGCCGACGT CACCGCCGAG
CAGGCCCTGG CCCACCCGAC CTGGTCCATG GGCCCGGTCG TCACCATCAA CTCGGCCTCC
CTGGTCAACA AGGGGCTGGA GGTGATCGAG GCCCACCTGC TCTTCGACAT CCCCTACGAC
CGCATCGAGG TGGTCGTGCA TCCGCAGTCG GTGATCCACT CGATGGTCAC CTTCGTCGAC
GGTTCGACGA TCGCGCAGGC CAGCCCCCCG GACATGCGGC TGCCGATCGC GCTCGCCCTG
GCCTGGCCGG ATCGGCTCGA CCCGGTCGCC GCCGCCTGCG ACTTCGCGGC GCCGACCGCG
TGGACGTTCG AGCCGGTGGA CCGCGCCGTG TTTCCCGCGC TGGACCTGGC CTACGCGGCC
GGCCGGGCCG GCGGCACGGT GCCGGCCGCC TTCAACGCCG CCAATGAAGA GGCCGTGCAC
GCCTTCCGCA CCGGTCAGGT GCGTTTCCCA GGTATCTCCG ATCTGCTGGC CGGCATCCTG
GACGAGGCCG ACCAAGCGCG GAGCAACCCG CGTGACGTGC ACGACGTCTG GGCCACGGAA
GAATGGGCCC GGCGACGGGC CCGCGAAATC ATCGCCCGGG CTGGTACCCC GATTGCGGTG
GGTGGACCGA GGGTGGGGGC GCAACGCTGA
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| Protein sequence | MILLGSTGSI GTQALDVIAA HPDRFEVVGL AAGGSNPDLF AAQAAAHPHA ALASATPAPP
VDGRPMLIGA RAATELVQTT EADVVLNGIT GSIGLEPTLA ALTAGRTLAL ANKESLVAGG
SLVTRAAAPG QIVPVDSEHS ALAQCLRSGA AGEVARLVVT ASGGPFRGWT RAQVADVTAE
QALAHPTWSM GPVVTINSAS LVNKGLEVIE AHLLFDIPYD RIEVVVHPQS VIHSMVTFVD
GSTIAQASPP DMRLPIALAL AWPDRLDPVA AACDFAAPTA WTFEPVDRAV FPALDLAYAA
GRAGGTVPAA FNAANEEAVH AFRTGQVRFP GISDLLAGIL DEADQARSNP RDVHDVWATE
EWARRRAREI IARAGTPIAV GGPRVGAQR
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