| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Namu_2066 |
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| Symbol | |
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| ID | 8447676 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nakamurella multipartita DSM 44233 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013235 |
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| Strand | + |
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| Start bp | 2278140 |
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| End bp | 2279021 |
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| Gene Length | 882 bp |
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| Protein Length | 293 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 645041190 |
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| Product | Integrase catalytic region |
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| Protein accession | YP_003201435 |
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| Protein GI | 258652279 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG2801] Transposase and inactivated derivatives |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.000000000000236626 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.0115324 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTGCGA CCGGCGCCCC GATCAGGGTG CCGGTCGCGG TGACGTTGCG GGTGCTCGGC
CTTTCGCGGG CCGGGTACTA CAAGTGGCTC AGCGACCCCG TATGCCAGCG GGACTACGAC
GACGCCCACC TCATCGACAA GCTCTACGAC CTCCATGGCG ACGATGCGAC GTTGGGCTAC
AGGTTCCTCA CCGACGAACT CGAAGACGAG CACGGCATCC AGGTCGGGGA GAACCGGGTG
CACCGCCTGT GCCGCATCGC CGGCATCACT GCCAGCCACC ACAAGAAGCG CTCCAAGACC
GGCTCGACCG GCCCCGCGCC ACACGACGAC CTCCTCGCGG TCGTCGACGA GCACGGCGTC
GTACGTCACG AGTTCCTCGC CGACGCCCCG AACAAGGTGT GGCTGTGGGA CATTTCCGAG
CACCCCACCC GCGAAGGCAA GCTCTACATC TGCGCGATCA AGGACGTGTG GTCGAACAAG
ATCGTGGGCT ACTCCATCGA CTCCCGGATG AAGTCGTCCC TGGCGCGGGC CGCGATGCGC
AACGCGATCG CGCTCCGCAG CCCGGCCGGG ACAGTCTGTC ACTCCGACCG AGGCGGTCAG
TTTCGTGCCA AGCGGACCCA GCGGCTGCTG GCGAACAACG ACCTGGTGGG GTCGATGGGC
CGCTCCCACG GCGCCGGCGA CAACGCCAGC ATGGAGAGCT TCTTTTCCCT GCTGCAGAAG
AACGTCCTGA ACACCCGCCG TTGGGACACC CGCGACGACC TCCGCCTCGC GATCGTCACC
TGGATCGAAA CCAAGTACAA CCGACGACGC CGCCAGCGGG CCCTCGGCAA GCTCACCCCG
GTCGAGTTTG AGATGATCTA CAAGGCCGCA GAAGCGGCCT GA
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| Protein sequence | MAATGAPIRV PVAVTLRVLG LSRAGYYKWL SDPVCQRDYD DAHLIDKLYD LHGDDATLGY
RFLTDELEDE HGIQVGENRV HRLCRIAGIT ASHHKKRSKT GSTGPAPHDD LLAVVDEHGV
VRHEFLADAP NKVWLWDISE HPTREGKLYI CAIKDVWSNK IVGYSIDSRM KSSLARAAMR
NAIALRSPAG TVCHSDRGGQ FRAKRTQRLL ANNDLVGSMG RSHGAGDNAS MESFFSLLQK
NVLNTRRWDT RDDLRLAIVT WIETKYNRRR RQRALGKLTP VEFEMIYKAA EAA
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