Gene Namu_2048 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNamu_2048 
Symbol 
ID8447657 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNakamurella multipartita DSM 44233 
KingdomBacteria 
Replicon accessionNC_013235 
Strand
Start bp2258367 
End bp2259182 
Gene Length816 bp 
Protein Length271 aa 
Translation table11 
GC content70% 
IMG OID645041172 
Productgeneral secretion pathway protein-related protein 
Protein accessionYP_003201418 
Protein GI258652262 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG3267] Type II secretory pathway, component ExeA (predicted ATPase) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.00486349 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00515414 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGAGCGTGC AACGCCTTCA GGCCCACTAC GGCTTCACCC GGATGCCGTT CGGCCGGAAC 
CTGGCCCCGG GCATGCTGCA TCGGCACCGC GGACTGGGCG AAGCGATCGC CCGGATCAGC
TGGTGCGTCG ACCAACACGC CCTCGGCGTG ATCACCGGCG AGGTCGGCGC CGGCAAGACC
GTCGCCGTCC GCGCCGCCAC CGCCGCCCTG GACAGCAGCC GGCACGTCGT CATCTACCTG
CCCAACCCGT CCGTCGGGGT CCGCGGCATG CTCCACCACA TCGTCGCCGC CCTGGGCCGG
ACCCCGTCGT TCTACACCTC GATCCTGGCC CCGCAAGCCG CCGACGCCCT CGCGGCCGAA
CACGCCGAAC GCGGCCGCAC CCCCGTGGTC GTGATCGATG AGGCGCACCT GTTGGACAAC
CAGCAACTCG AAGCACTGCG CATGCTGTCC AACCACGACA TGGACTCCGG CAGCCCGTTC
GCCGCGCTGC TCGTCGGGCA ACCCACCCTG CGGCACCGGC TGCGCCTCGG CGTGCTCGCC
GCGCTGGACC AACGGATCTC GGTGCGCTGC ACCCTGACCG GGATGACCGA CCAGGAAACC
GCGGACTACC TCACCCACCA CCTCAAGATC GCCGGCCGCA GCGACACCCT GTTCAGCGGC
GACGCCACCA CCCTGATCCA CAACGCCGCC CGCGGCTACC CCCGCGCCAT CAACAACCTC
GCGATCAACG CCCTGACCGC GGCGTTCGCC CGCAACCAGG CCATCGTCGA CGAGAAATCA
GCCCGGGCCG CGATCGCCGA AACAGGAGGC GAATGA
 
Protein sequence
MSVQRLQAHY GFTRMPFGRN LAPGMLHRHR GLGEAIARIS WCVDQHALGV ITGEVGAGKT 
VAVRAATAAL DSSRHVVIYL PNPSVGVRGM LHHIVAALGR TPSFYTSILA PQAADALAAE
HAERGRTPVV VIDEAHLLDN QQLEALRMLS NHDMDSGSPF AALLVGQPTL RHRLRLGVLA
ALDQRISVRC TLTGMTDQET ADYLTHHLKI AGRSDTLFSG DATTLIHNAA RGYPRAINNL
AINALTAAFA RNQAIVDEKS ARAAIAETGG E