Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Namu_2005 |
Symbol | |
ID | 8447614 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nakamurella multipartita DSM 44233 |
Kingdom | Bacteria |
Replicon accession | NC_013235 |
Strand | + |
Start bp | 2212658 |
End bp | 2214445 |
Gene Length | 1788 bp |
Protein Length | 595 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 645041133 |
Product | GAF sensor signal transduction histidine kinase |
Protein accession | YP_003201379 |
Protein GI | 258652223 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG4585] Signal transduction histidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.0401989 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.00207123 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGACGACGC CGGATGGACC GGATTTCGAA CGGGCCGGGC CGCCGCCCGC GGCCGGTCAG CCGACCGCGC GCCGGGGCCG GTCCAGGCCC TGGCGGGAGG ACCTGCCGCA GGTGGGTCAG CGGCTGTCCC AGGAGCGGCT GCGGGAGCTG CTGGACGAGG TCGGCGACCG CGTCGAAGGC ATCGTGTCCG ACACCCGGGA GCGGATGGAC GCGCTGCTGG ACGCCGTGCT GGCGGTGTCC TCCGGCCTGG ACCAGGACGT CACCCTGCGC CAGATCGTGC AGGCGGCGAT CGAGCTGGTC GACGCCCGAT TCGGCGCGCT GGGGGTGCTC GGCGAGGGCG GCATGCTCAG CAAGTTCGTC CACGTCGGCA TCGACGATCA GACCCGCGAG CTGATCGGAC CGCTGCCCAC CGGGCACGGG GTGCTCGGGG TGGTGATCGA GGAGAACAAG CCGCTGCGGC TGGCGGACCT GTCGCAGCAT CCGATGTCGA TCGGCTTCCC GCCGCACCAT CCGCCGATGC GAACCTTCCT CGGCGTGCCG GTCCGGGCCC GGGGGGAGAC GTTCGGCCGG CTCTACCTGA CCGAGAAGCG CAACGGCGAG GAGTTCACCT TCGACGACGA GGTCGTGGTC TCGGCCCTGG CCGGTGCGGC CGGGATCGCC ATCGACAACG CCCGGCTGTA CGAAGCGGCC CGGCAGCGGC AGGCCTGGCT GGAGGCCACC GGCGAGGTCA CCGCCCAGCT GCTCGGCGGC TCGGACACCG AGGAGGCCCT GCGCCTGATC GCCAGCCGGG CCCGCGAGCT CACCAAGGCC GATCACACCA TGATCGCGTT GCCGGTCGAG CCGGCCGACG GCGCAGCCGA GCCGGGCGAG CTGGTGATCG CGGTCAGCGT CGGGCTGGAC TCGGTCGAGC TGACCGGCCG GCGGGTCCCG GTCGCCGGAT CGACCATGGG CACGGTGTTC CTGGACCGGC TGCCGCGCAA CGTGCTGCGG CTGGACTTCG ACCTGACCGG GCAGTTCGGT CCGGCGATGG TGCTGCCGTT GGGCACCGGC GAGCAGATCA GCGGGGTGCT GCTGACAGTG CGGCGGCCCG GGTCCGACCA GTTCGACGAG CAGGAGCTCA ACCTGGTCTC CACCTTCGCC GACCAGGCCG CGCTGGCCCT GGATCGGGCG GAGAGCCAGC TGGCCCGGCG GGAGATGGAG GTCCTGGAGG ACCGCGACCG GATCGCCCGG GACCTGCACG ACCACGTCAT CCAGCGGCTG TTCGCGATCG GGCTGGGCAT GCAGAGCACC CACCGTCGGG AGAAGTCCCC CCACCAGGCG GCCCGGCTGG CCGACCACAT CGACCAGTTG CACGACGTCA TCCAGGAGAT CCGGACGGCG ATCTTCGACC TGCAGGCGGG CCCGGCCCAG GAGCCCGGGT TGCGGTCCGC GCTCAATCAG GTGATCTCCG ACCTCACCGG GGACGCGGCG CTGCGCACGA CCGTACGGAT GTCCGGCCCG CTGGACGTGA TCCCGCCCGA CCTGGCCCAG GACGTGCAGG CGGCCCTGCG CGAGGCGGTC AGCAACGCGG TCCGGCACGC CCAGGCCACC GAACTGATCA TCACGGTCTC GGTCGAGGAC GATCTGGTCA TGGACGTGAC CGACAACGGG GTCGGGCTGC CCGAAACGGT CGCCCGCAGC GGTCTGCACA ACCTGGGCCG GCGGGCCGCG GCGGCCGGCG GCGCCCTGTC GGTCACCCGC CCACCGGCCG GCGGCACCCG GCTGATCTGG ACCGCGCCGC TGCCCTGA
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Protein sequence | MTTPDGPDFE RAGPPPAAGQ PTARRGRSRP WREDLPQVGQ RLSQERLREL LDEVGDRVEG IVSDTRERMD ALLDAVLAVS SGLDQDVTLR QIVQAAIELV DARFGALGVL GEGGMLSKFV HVGIDDQTRE LIGPLPTGHG VLGVVIEENK PLRLADLSQH PMSIGFPPHH PPMRTFLGVP VRARGETFGR LYLTEKRNGE EFTFDDEVVV SALAGAAGIA IDNARLYEAA RQRQAWLEAT GEVTAQLLGG SDTEEALRLI ASRARELTKA DHTMIALPVE PADGAAEPGE LVIAVSVGLD SVELTGRRVP VAGSTMGTVF LDRLPRNVLR LDFDLTGQFG PAMVLPLGTG EQISGVLLTV RRPGSDQFDE QELNLVSTFA DQAALALDRA ESQLARREME VLEDRDRIAR DLHDHVIQRL FAIGLGMQST HRREKSPHQA ARLADHIDQL HDVIQEIRTA IFDLQAGPAQ EPGLRSALNQ VISDLTGDAA LRTTVRMSGP LDVIPPDLAQ DVQAALREAV SNAVRHAQAT ELIITVSVED DLVMDVTDNG VGLPETVARS GLHNLGRRAA AAGGALSVTR PPAGGTRLIW TAPLP
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