| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Namu_2000 |
|---|
| Symbol | |
|---|
| ID | 8447609 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nakamurella multipartita DSM 44233 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013235 |
|---|
| Strand | - |
|---|
| Start bp | 2207677 |
|---|
| End bp | 2208585 |
|---|
| Gene Length | 909 bp |
|---|
| Protein Length | 302 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 645041128 |
|---|
| Product | UspA domain protein |
|---|
| Protein accession | YP_003201374 |
|---|
| Protein GI | 258652218 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0589] Universal stress protein UspA and related nucleotide-binding proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 0.0511167 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.00443199 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | GTGGGCATCG AACGGCAGGC CACGATCACC GTGGGCGTGG ACGGCTCACC CGAGTCGATG
GTGGCCGCGA CATGGGCGGC CCAGGAGGCC GCGCGGCGGC GGATGACACT GGAGCTGCTG
CTGTCCATCA ACGAACCGCT GGAGAACCAT TCCGGGTACG TGTTTCCCGC CCCGGTGATC
GAGGCGGTGC GCTCGGCGAA CCGGGAACGC CTGGCCGACG TCGCCGCCGT CGTCCGGCGC
GAACACCCGG ACCTTCAGGT GCGGACCAGC CTGGATTTCG TCGACCCGCG GCGGGCCCTG
GTCACCCGGT CCCGGCACAC GTCGATGACG GTCGTCGGCA CCCGCGGGCA CGGCCGGCTG
CCGGAGGTTC TCGTCGGCTC CGTCGCCCTG TACGTGGCCG CCCACGCGCA CTCGCCCGTC
GCGGTCGTGC CGCCGGCCGC CGACCTGACG GCAGCCGGAC CCGGCGGCCC GGTGGTGGTC
GCGGTGGACG GCCGCCCGGA CAGCATCTCG GCCATCGGCT TCGCCTTCGA CGAGGCCGCC
GTGCACCACA CGGAACTGGT CGCGGTCCTG GTCTTCGACG AGCTGGCCTA CCGCGGATTC
GCCAAGGGCG GCAGCCAGAT CGGTCACCTG GAGGACGATG AGGAACGGGC CGTGCTGGCG
CGGGAGCTGG CCGGATGGGC CGAGAAGTAC CCGGACGTCC CGGTTCGGCA GCTGGTGCTG
CGTGGGCAGC CCGCGCAGAC CCTGCTGCAC TACGCGGCCG GCAGTCCGGC GGCGCAGCGG
CCGCGCCTGC TGGTGGTCGG CAGCCGGGGG CGCGGCGGCA TGGCCGGTCT GCTGCTCGGC
TCCACCAGCC AGCGGCTGGT CACCCAGGCC ACGGTGCCGG TGATCGTGGT CCGCCCGGAA
CCGGGGTGA
|
|---|
| Protein sequence | MGIERQATIT VGVDGSPESM VAATWAAQEA ARRRMTLELL LSINEPLENH SGYVFPAPVI
EAVRSANRER LADVAAVVRR EHPDLQVRTS LDFVDPRRAL VTRSRHTSMT VVGTRGHGRL
PEVLVGSVAL YVAAHAHSPV AVVPPAADLT AAGPGGPVVV AVDGRPDSIS AIGFAFDEAA
VHHTELVAVL VFDELAYRGF AKGGSQIGHL EDDEERAVLA RELAGWAEKY PDVPVRQLVL
RGQPAQTLLH YAAGSPAAQR PRLLVVGSRG RGGMAGLLLG STSQRLVTQA TVPVIVVRPE
PG
|
|---|
| |