Gene Namu_1993 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNamu_1993 
Symbol 
ID8447602 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNakamurella multipartita DSM 44233 
KingdomBacteria 
Replicon accessionNC_013235 
Strand- 
Start bp2201018 
End bp2201626 
Gene Length609 bp 
Protein Length202 aa 
Translation table11 
GC content73% 
IMG OID645041121 
Producttranscriptional regulator, TetR family 
Protein accessionYP_003201367 
Protein GI258652211 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.00019531 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.0761383 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCCAGG ACGAGGTGCG GTACGGCACC CAGCGAGCCG CGGCGGCGCG TAACCGAGCG 
GTGATCCTGG ACGCCGCCCA CGACCTGCTG GCGGACAACC CGAACGCGTC GATGAACGAG 
ATCGCCAAGC GGGCCGGCGT CGGCGCCGGC ACCCTGTACC GGCACTTCCC CACCCGGGAG 
GACCTGCTAC TGGCCGCCTA CCGGCACGAC GTGCAGCGGT TGGTGGATTC GGTCGCCGAC 
CGGCTGGCCA CCCTGCCGCC CCGGCAGGCC TTCGAGCGCT GGTTCGAGGA CCTGGCCGGT 
TACATCCGGG TCAAGCACGG CCTCGGCGAG GCCCTGCACA CCGCGGCCGC CCAGGAAGCG 
ATCAACGAGA CCTACGAGCC GGTCACCGCG GCGATCGGCC AACTCCTGCG GGCCGCCGAG 
CGCAGCGGCG AGGTGCGCGC AGGGCTGGAC CCCGGGGACG TCCTGCTGCT GATGGGATTC 
CTGTGGCGGA TCCCACCGGG TCCGGGTCGC GCCGAGCAGA GCCGCCGGCT CATCGCCGTC 
GTTTTCGACG GACTGTCCCC CGACCAACCC GGCGACGACG ACCGCTCGGG CACCCGCCGG 
CGGTCATGA
 
Protein sequence
MTQDEVRYGT QRAAAARNRA VILDAAHDLL ADNPNASMNE IAKRAGVGAG TLYRHFPTRE 
DLLLAAYRHD VQRLVDSVAD RLATLPPRQA FERWFEDLAG YIRVKHGLGE ALHTAAAQEA 
INETYEPVTA AIGQLLRAAE RSGEVRAGLD PGDVLLLMGF LWRIPPGPGR AEQSRRLIAV 
VFDGLSPDQP GDDDRSGTRR RS