| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Namu_1913 |
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| Symbol | |
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| ID | 8447520 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nakamurella multipartita DSM 44233 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013235 |
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| Strand | - |
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| Start bp | 2107585 |
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| End bp | 2108634 |
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| Gene Length | 1050 bp |
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| Protein Length | 349 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 645041043 |
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| Product | 3-dehydroquinate synthase |
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| Protein accession | YP_003201291 |
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| Protein GI | 258652135 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0371] Glycerol dehydrogenase and related enzymes |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.00367507 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.000286832 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGGACATCC GGATCCCTTC GCTGCTGCGG ATCAAACCCG ACACCCTGTT CAAGCTGGGC
AAGTACCTGC GCAAGCACGG CTTCGACCGC ATCGCGCTGT GCTACGGCGA GGGCATCGAG
GAGCTGGTCG GCCGCAGCAT CCGCATCTCC CGGGATTCCT CCGAGATCAC CGTGGTCCGG
CAGGAGGTCG TGCACAGCAA CGACGTCACC GACATCATGG GGGTGGCGTT CCACCTGCCC
CGCGGTACCC AGGCCGTGGT GGCCGTCGGC GGCGGCGTCG CGGTCGATGC GGGCAAGTAC
ATCGGCTTCC TCAACCAGCT CCCGGTGGTC GCGGTGCCCA CCGCCATCTC CAATGACGGG
TTCGCCTCCC CCGGCGCCAG CCTGCGGGTG GAAGGGCAAC GGATCAGCGC CAAGGCGGCC
ATCCCGTTCG GCGTCGTCAT CGACACGACG GTGATCGCCG CCTGCCCGCC CCGGTTCACC
CTGTCCGGCA TCGGCGACCT GATCTCCAAG TACAGCGCCA TCGCCGACTG GAAGCTCTCG
TACCACGCGA CCGGCGAGGC CATCAACGAC TTCTCCGCGA TGATCGCGCT GCAGAGCGTG
GAGAACCTGG TCAACCACCC GGACAAGTCG ATCGAGGACC TGGGGTTCCT GCAGCTGGTC
TGCGGGGCGC TGGTGATGAG CGGGGTGTCG ATGGAGGTCG CCGGCTCGTC CCGGCCCGCC
TCGGGCAGCG AGCACCTGAT CTCGCACGCC TACGACCGGC TGGCCGCCCG GCCGCGGATG
CACGGCGAGC AGGTTGGGGT GGCCACGATC GCCACCACCT GGCTGCAGGA CAACCCGCAG
CGCGACACCG TGCTGCGCGT GCTGGAGCAG ACCACCTTCC TCAGTGCCAT CCGGGCCGAT
CCGCTGGACC GGGCCACCTT CCTGGCCGCC ATCGCCGCCG CCCCGGCGGT CAAACCCGGC
TACCACACGG TGCTGTCCGA GCCGGGCGCG GTCGAGCGGC TGCAGGCCCA TATCGCCGCG
GACCCGCTCT GGCAGGATCT GCTGGCCTGA
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| Protein sequence | MDIRIPSLLR IKPDTLFKLG KYLRKHGFDR IALCYGEGIE ELVGRSIRIS RDSSEITVVR
QEVVHSNDVT DIMGVAFHLP RGTQAVVAVG GGVAVDAGKY IGFLNQLPVV AVPTAISNDG
FASPGASLRV EGQRISAKAA IPFGVVIDTT VIAACPPRFT LSGIGDLISK YSAIADWKLS
YHATGEAIND FSAMIALQSV ENLVNHPDKS IEDLGFLQLV CGALVMSGVS MEVAGSSRPA
SGSEHLISHA YDRLAARPRM HGEQVGVATI ATTWLQDNPQ RDTVLRVLEQ TTFLSAIRAD
PLDRATFLAA IAAAPAVKPG YHTVLSEPGA VERLQAHIAA DPLWQDLLA
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