| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Namu_1886 |
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| Symbol | |
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| ID | 8447493 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nakamurella multipartita DSM 44233 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013235 |
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| Strand | - |
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| Start bp | 2071827 |
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| End bp | 2073083 |
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| Gene Length | 1257 bp |
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| Protein Length | 418 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 645041016 |
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| Product | Integrase catalytic region |
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| Protein accession | YP_003201264 |
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| Protein GI | 258652108 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.0003225 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.0562744 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGTCTC GGGCCGAGAT CACCACCAGG TACGCCAAGG CGTTCAAGGC TGCGGACAGG
CGGACGAAGG GCCGGATCCT GGACGAGGTG GTGTCCGTGA CGGGCTGGTC GCGGGACAAC
GCCCGGCGAC GCTTGACCAG CGCCGCGCAG TGCCCGCCGG GCGGCGGCCG ACAGGTCGCC
CAGCGGCCCA GGAAGCAGCG GGCGAACAAG TTCTCCTACG AGGCCGTAAA GGTCCTCCAG
CGGGTCTGGG CGGCTTCCGG TGGGCAGTGC GGCAAGTACC TGGCCGCATC GATGGACACG
CAACTGGACG GGCTGGAACG GCACGGGGAG CTGGTCGACG GCGAGTGCCG GTACAGCGCT
TCGGTGCGGG CCGAGCTGCT CGCGATGTCG CCGGCGACGA TCGACCGCTA CCTGCGGACC
GCGAAGGCCA CCGACCAGGT CCGCGGTGTC TCGACCACGA AACCGTCACC GTTGCTGCGG
TCCTCGATCA AGATCCGTAA GGCGGGCGAC GAGGTCGAGG CCGAGCCCGG CTTCTTCGAG
GGCGACACGG TTGCACATTG CGGCCCGACC CTGCGGGGCG AGTTCGCTCG CTCGGTGAAC
CTGACCTGTG TGCATACCGG GTGGGTCTTC ACCCGCTCGA CGCGCAACAA CGCGCACGCC
AACATCCTGG CCGCGCTGCA GGCCGGGGTG CAGGAGATCC CTTTCGCGGT CACCGGTCTG
GACTTCGACA ACGGAGGTGA GTTCCTGAAC CGGGCCGTCA TCAAATGGGC CGCCGAGCGA
GACATCTACT TCACCCGGTC CCGGCCGTAC AAGAAGAACG ACCAGGCCAC GATCGAGTCG
AAGAACAACC ACCTGGTCCG CCGGTACGCG TTCTACTACC GGTACGACAC CGACGAGGAG
CGGCACGCGT TGAACCGGCT CTGGAAGCTG GTCAACGACC GGCTCAACTA CCTCACCCCG
ACGATCAAGC CGGTCGGCTG GGGTGAGAAC AAGGCCGGTC GCCGCAAACG CCTGTACGAC
AAGCCGCAAA CCCCGTTGAG TCGGCTGCTG GCCGCCGGCA CGCTGTCGCC GGCGCAAGCC
CACGAGCTGA CCGCCTACCG GGACGGGCTC AACCCAGCCG CGCTCGCCCG TGAGATCGCC
GACATTCAAG CCGTGCTGCT GGGCCTGGCC AAGAACAAGA CCGAGCAGCT CTACCTCGCG
ACCGTCCCCA AGGCACTGCC CGACGTGCGC AAAGGCGTCC GGATCCGGGC CGGCTGA
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| Protein sequence | MASRAEITTR YAKAFKAADR RTKGRILDEV VSVTGWSRDN ARRRLTSAAQ CPPGGGRQVA
QRPRKQRANK FSYEAVKVLQ RVWAASGGQC GKYLAASMDT QLDGLERHGE LVDGECRYSA
SVRAELLAMS PATIDRYLRT AKATDQVRGV STTKPSPLLR SSIKIRKAGD EVEAEPGFFE
GDTVAHCGPT LRGEFARSVN LTCVHTGWVF TRSTRNNAHA NILAALQAGV QEIPFAVTGL
DFDNGGEFLN RAVIKWAAER DIYFTRSRPY KKNDQATIES KNNHLVRRYA FYYRYDTDEE
RHALNRLWKL VNDRLNYLTP TIKPVGWGEN KAGRRKRLYD KPQTPLSRLL AAGTLSPAQA
HELTAYRDGL NPAALAREIA DIQAVLLGLA KNKTEQLYLA TVPKALPDVR KGVRIRAG
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