| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Namu_1884 |
|---|
| Symbol | |
|---|
| ID | 8447491 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nakamurella multipartita DSM 44233 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013235 |
|---|
| Strand | + |
|---|
| Start bp | 2069437 |
|---|
| End bp | 2070294 |
|---|
| Gene Length | 858 bp |
|---|
| Protein Length | 285 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 645041014 |
|---|
| Product | formamidopyrimidine-DNA glycosylase |
|---|
| Protein accession | YP_003201262 |
|---|
| Protein GI | 258652106 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0266] Formamidopyrimidine-DNA glycosylase |
|---|
| TIGRFAM ID | [TIGR00577] formamidopyrimidine-DNA glycosylase (fpg) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.0177136 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.0421989 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCCTGAAC TTCCCGAAGT CGAAACCGTC CGTCGCGGCC TGCTGACCCA TCTCGCGGGC
CGGCGCATCC GGACGGTTCG CGTGCACCAC GACCGCGCCG TCCGCCGGCA TCCCGGCGGA
CCCGACGACT TCCAGGCCGT GCTGGCCGGC CGCCTGGTCC GCGACGTGCG CCGGCGGGGC
AAGTACCTGT GGTGGGCGCT GGACGACGGC GACGCCGTGC TCGCCCACCT GGGCATGAGC
GGCCAGTTCC GCGTCGCCGG CCCGGCCGGA CCCATTCCCG AGCCGCTGCA CCCGCATCTG
CGGATCCGCT TCGACTTCGA CGACGCCGGC CCCAGCCTGG ACTTCTTGGA CCAGCGGACC
TTCGGCGGCA TGACCTATGC ACCCGGCGGG GCCGAGCTGC CGGCGGCGAT CGCCCACATC
GCCCGCGACC CGTTGGACCC GGAGTTCAGC GCCGCCGGCG CAGTGGCGGC CCTCCGGCAC
AAGCGAACCG GGATCAAGCG GGCCCTGCTG GACCAGACGG TGGTCTCCGG GGTCGGCAAC
ATCTACGCCG ACGAGGCTCT GTGGCGGGCC CGGATGCACT TCGACCGGCC CACCGAGCGG
CTCACCCGGC CGCAGGCGGC GACGGTGCTG GCCGCCGCGA CCGAGGTGAT GACTGATGCG
CTGGCCGTCG GCGGCACCTC CTTCGACGCG CTGTACGTCA ACGTCAATGG CGAGTCCGGC
TACTTCGACC GGTCGCTCAA CGTGTACGGG CGGGCCGACC GGCCCTGCCC GCGGTGCGGG
ACGCCGATCC GCCGGTCGGC GTTCATGAAT CGCTCGTCGT ACTGGTGCCC GCGCTGCCAA
CGGCCACCCC GCCCGTAG
|
|---|
| Protein sequence | MPELPEVETV RRGLLTHLAG RRIRTVRVHH DRAVRRHPGG PDDFQAVLAG RLVRDVRRRG
KYLWWALDDG DAVLAHLGMS GQFRVAGPAG PIPEPLHPHL RIRFDFDDAG PSLDFLDQRT
FGGMTYAPGG AELPAAIAHI ARDPLDPEFS AAGAVAALRH KRTGIKRALL DQTVVSGVGN
IYADEALWRA RMHFDRPTER LTRPQAATVL AAATEVMTDA LAVGGTSFDA LYVNVNGESG
YFDRSLNVYG RADRPCPRCG TPIRRSAFMN RSSYWCPRCQ RPPRP
|
|---|
| |