| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Namu_1842 |
|---|
| Symbol | |
|---|
| ID | 8447447 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nakamurella multipartita DSM 44233 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013235 |
|---|
| Strand | - |
|---|
| Start bp | 2026254 |
|---|
| End bp | 2027270 |
|---|
| Gene Length | 1017 bp |
|---|
| Protein Length | 338 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 645040971 |
|---|
| Product | cytochrome d ubiquinol oxidase, subunit II |
|---|
| Protein accession | YP_003201221 |
|---|
| Protein GI | 258652065 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1294] Cytochrome bd-type quinol oxidase, subunit 2 |
|---|
| TIGRFAM ID | [TIGR00203] cytochrome d oxidase, subunit II (cydB) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.00514347 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.183077 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCCTGC CCACCGTCTG GTTCGTGATC GTGGCGTTCT TCTGGACCGG TTTCTTCGTC
CTGGAAGGAT TCGACTTCGG AGTCGGCGCC CTGCACAAGG TGGTCGGCCG CACCGACACC
GAACGCCGGG TCGCCATCAA CTCGATCGGC CCGTTCTGGG ACGGCAACGA GGTCTGGCTG
ATCGTGGCCG GGGCGTCGAT GTTCGCCGCC TTCCCCAACT GGTACGCCAG CTGGTTCTCT
GCGCTGTACC TGGCCCTGTG GCTGCTGCTG GCCGCGCTGA TCGTGCGCGG GGTGTCCTTC
GAGTTCCGCG GCAAGTTCGC CGCGCCGGCC TGGCGGCACA CCTGGGGCTG GACGCTGACC
GTGGGCTCGG TGCTGGCCCC GCTGCTGATC GGGATCGGCC TGGGCGACCT GCTCGCCGGC
CTGCCGATCG ACGCGGCCGG CGATTTCACC GGCAGCTTCC TGGACCTGCT GACCCCGTTC
GGGCTGCTGC TCGGGCTGAC CCTGCTGACT CTGAGCCTGC TGCACGGCGC CGCCTTCCTG
ACCCTGCGCA CCACCGGCCC GGTCCTGGAG CGCTCCCGCG CGCTGGTCCG CCGGCTGGCC
CTGCCCGCGG TCGCGTTGGT GCTGGTGGCC GCGGTGTGGA TGGTGGTGCT GGCCGCGCCC
GGCGGGTGGG GCTACCTGGC CGTGGCCGTG CCGGCCGTCG CCGTCATCGC CGCGGCGGTC
ACCGCGTTGC CGGGGCGGGC CGGGCCGGCC ACCTTCGTGG CCACCGCGAT CAGCATCGGC
GCCCTGGTGG CCGCGCTGTT CGTCTGCCTG TACCCCACCC TGCTGGTGTC GACGACCGAC
CCGGCGTACT CGTTGACCGT CACCAACTCG GCATCCAGCC CCTACTCGCT GCAGGTGATG
ACGGTGGCCG CAGCGGTGCT GACCCCGCTC GTGCTGCTGT ACCAGGGCTG GACGTACTGG
GTGTTCCGCC GACGGCTGCG CACCGAACCC GCGGCCCCGG CGAGCGCCGC CGCATGA
|
|---|
| Protein sequence | MTLPTVWFVI VAFFWTGFFV LEGFDFGVGA LHKVVGRTDT ERRVAINSIG PFWDGNEVWL
IVAGASMFAA FPNWYASWFS ALYLALWLLL AALIVRGVSF EFRGKFAAPA WRHTWGWTLT
VGSVLAPLLI GIGLGDLLAG LPIDAAGDFT GSFLDLLTPF GLLLGLTLLT LSLLHGAAFL
TLRTTGPVLE RSRALVRRLA LPAVALVLVA AVWMVVLAAP GGWGYLAVAV PAVAVIAAAV
TALPGRAGPA TFVATAISIG ALVAALFVCL YPTLLVSTTD PAYSLTVTNS ASSPYSLQVM
TVAAAVLTPL VLLYQGWTYW VFRRRLRTEP AAPASAAA
|
|---|
| |