| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Namu_1837 |
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| Symbol | |
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| ID | 8447442 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nakamurella multipartita DSM 44233 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013235 |
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| Strand | - |
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| Start bp | 2018355 |
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| End bp | 2019131 |
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| Gene Length | 777 bp |
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| Protein Length | 258 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 645040966 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_003201216 |
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| Protein GI | 258652060 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.00311801 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.334735 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTGCAC CCCTGGCCGG CAAGGTCGCC GTCGTCACCG GCGGCAACAG CGGCATCGGC
AAGGCCATCG TCATCGCGCT GGCCGCCCAG GGCGCCAGCG TCGTCATCGA CTACGTCTCG
CACCCCGAGG CCACCGAGGC CCTCGAGCAG CAGCTCGCCG CCCTCGGCGA GGACCAGGTG
GTCGGCGTGG ACGCCGACGT CAGCAAGGTC GCCGACCTGC AGCTGCTCGT GGACAAGGCC
GTCTCCGCGT TCGGCCGGCT GGACGTCATG GTCAACAACG CCGGCGTGGA GACCCGCACC
GACGTGCTGT CCACGGCCGA GGAGCAGTAC GAGTTCGTGA TGAACGTGAA CCTCAAGAGC
GCGTTCTTCG GCACCCAGCT CGCGGCCAAG CAGATGATCA AGCAGGGTGA CGGTGGCGCC
ATCATCACCA TCAGCTCGGT GCACGAAGAC TGGCCGATGC CCGGCAACAC CGCCTACTGC
CTGTCCAAGG GCGGGTCCAA GATGCTCACC CGCACCGCCG GCCAGGAGCT GGGACCACAC
GGGATCCGGC TGGTCAACGT CGGCCCGGGC GCGGTGGCCA CGCCGATCAA CACCTCGACC
ATGGCCGACC CGGCGAAGAT GAAGGTGCTG GACGCGGCGA TCCCGCTCGG CCGGATGGCC
CAGCCCGAGG AGATCGCCTC CGTGGTGGCC TTCCTGGCCT CCGACGGCGG GGCCTACCTC
AACGCGACCA CGGTGATCGT CGACGGCGGC CTCATGCACT CCAGCCCCGG CCTGTAG
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| Protein sequence | MSAPLAGKVA VVTGGNSGIG KAIVIALAAQ GASVVIDYVS HPEATEALEQ QLAALGEDQV
VGVDADVSKV ADLQLLVDKA VSAFGRLDVM VNNAGVETRT DVLSTAEEQY EFVMNVNLKS
AFFGTQLAAK QMIKQGDGGA IITISSVHED WPMPGNTAYC LSKGGSKMLT RTAGQELGPH
GIRLVNVGPG AVATPINTST MADPAKMKVL DAAIPLGRMA QPEEIASVVA FLASDGGAYL
NATTVIVDGG LMHSSPGL
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