| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Namu_1824 |
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| Symbol | |
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| ID | 8447429 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nakamurella multipartita DSM 44233 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013235 |
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| Strand | - |
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| Start bp | 2003820 |
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| End bp | 2004812 |
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| Gene Length | 993 bp |
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| Protein Length | 330 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 645040953 |
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| Product | MscS Mechanosensitive ion channel |
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| Protein accession | YP_003201203 |
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| Protein GI | 258652047 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0668] Small-conductance mechanosensitive channel |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.000045049 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.0757476 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAGATCA CCGCGCCGGA GTGCGCGTCC GATCCCGGAT CGCTGTGCCA GTGGGTCTGG
GACAACACCG GGGCCGATTT TCTCGCCCGC AACAGCGACC AGGTGGCCTC GTCCACCCTG
CACATCGCCG CGATCGTGTT GATTGCCGTC GTCGTGCGGT TCCTGGCCTA CCGGGCGATC
AACCGGCTCA CCCGGCTGTC CACCGAGGAC GGCACCTCGG CGGCCCTGCG GCCGTTGCGG
GCCGGCGCCC GGTTCGCCCT GGCCGGCGGG TTGGCCGCGG ATCGGCGGGC CCAGCGCACG
CAGGCCGTCG GCTCGCTGCT CAAGTCGGTG ACCTCGTTCG CGGTGATCTG CATCGCCGTG
GTGCTGATCC TGGCCGAACT GGGCTTCGAC GTGGCGCCGA TCCTGACCTC GGCCGGCATC
GCCGGCGTCG CGCTCGCCTT CGGCGCGCAG AACCTGGTCC GGGACTTCCT GGCCGGGATC
TTCATGACCC TGGAGGACCA GTACGGCGTC GGCGACACCG TCGACCTGGG CTCGGCCAGC
GGCACCGTGG TCGCGGTCAG CCTGCGCACG ACCACCCTGC GGGCCGGCGA CGGCACGATC
TGGCACGTGC GCAACGGTGA GGTGCTGCGG GTCGGCAACT CCAGCCAAGG TCAGGCCGTG
GTCACCATCC CGATCACCGT GCCCTACGAC AGCGACACCG ACCGGGCCGC GACGATCGCC
CTGGAGCAGG CCACGGCGGT GGCCCAGACC CCGCAGTTCG AGTCCTCGGT GCTGGTCGAA
CCCACGCTGC TGGGCATCAC CGACGTCGCC CCCGGGACCG TCACCCTGGG CCTGCAGGCC
ACCGTGGTCA CCGGCGACAA GGACGCCTAC ATCCGCGCCG TGCGCTCGGC GATCCGCCGC
TCGTTCGAGC AGGCCCGCAA GGACGACCCG ACGGCCGACT TCCGGCCGCC GTTGCTGGCC
GGCGAGCCGG CGCCGGGGAG CCCCCGACCG TGA
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| Protein sequence | MEITAPECAS DPGSLCQWVW DNTGADFLAR NSDQVASSTL HIAAIVLIAV VVRFLAYRAI
NRLTRLSTED GTSAALRPLR AGARFALAGG LAADRRAQRT QAVGSLLKSV TSFAVICIAV
VLILAELGFD VAPILTSAGI AGVALAFGAQ NLVRDFLAGI FMTLEDQYGV GDTVDLGSAS
GTVVAVSLRT TTLRAGDGTI WHVRNGEVLR VGNSSQGQAV VTIPITVPYD SDTDRAATIA
LEQATAVAQT PQFESSVLVE PTLLGITDVA PGTVTLGLQA TVVTGDKDAY IRAVRSAIRR
SFEQARKDDP TADFRPPLLA GEPAPGSPRP
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