Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Namu_1815 |
Symbol | |
ID | 8447420 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nakamurella multipartita DSM 44233 |
Kingdom | Bacteria |
Replicon accession | NC_013235 |
Strand | - |
Start bp | 1991728 |
End bp | 1993017 |
Gene Length | 1290 bp |
Protein Length | 429 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 645040944 |
Product | hypothetical protein |
Protein accession | YP_003201194 |
Protein GI | 258652038 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.00434619 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
| |
Sequence |
Gene sequence | ATGGCGCCGC TGTCCCCGGT GCCGCCCAGC GAGTACGACT CGCCCGCGGT GCGCGCCCAA CGCCGGTTGG ATCGCGCCCG CCGGCGGGCG CGCCGGCGAG CCGCCTGGTG GTACTCGCCG ATGATCATCG GCTGCCTGCT GGCCGGCCTC TGGGGCCTGC TCAAGACCGA CCAGTACCTG GCCGACCAAC TCTTCTGGCC GTCGGCCGGT GCCCAGTTCG TGCCGGTCGG ACCGGACCCG GACCGGGCCG ACGAGACCGG CGGCCCGATC GTGGTGGTGG CCGGCGGCCT GAACCGCAAG AGCGGCACCG GACCGGCCCT GGCCCTGCGG CCGGCCCTGA CCGCCGGCTC CGACCGGGAC GGCCAGAGCC CGACCCGGGT GTTCAGCCTG GTGTACGGCA GCGGCATCAA CGACCGGGAC ATCCAGGACA AGTTCGACGC GCTGATCAGC CGGACCCAGC CGGACCGGGT CGACTTCTTC GGCAGCAGCA TGGGCGGCGA CGTCGTGCTC GCCCTGGCCC GGCACCTGCG TCAGAGCCAA CACGACTGGC GCTCGTCCCG GGCGGCGGAG CCCACCCCGG ACGCCCGACC GATCCCGGCC CAGGTCAGGT CCGGGTCCAC CGGTCCGATC CCCGTCACCA CCTTCGCCGG CCGGGCCGCC GGACCCGACG CCGCCACCCG CACCGACACC GACACCGACG GCTCGACGTC GGGGCAACCG CCCGCTCCGC CCCAGCTGGG CACCATCTAC CTGGACTGCA CGCCCTTGTC CGTCGCCGAC GTGCGGGATT CCGGCCGGAC CCAGGCGGAC GCACTGACCG GCCTGTCCGA GGCACTGCAG ACCGACGGCG GGGTCGGACT GCGGTTGACC GCCGAAGTGC TGGCGCAGCA ACGGCAGTGG TCCGCCGGCC GGTTCCCCTT CGTGGACGTG CGCTGGGCCG AGCTGACCGA CAAGGTCGTC CAGGTGTGGC GGGACAAGAT CGACGGCCCC GGCGTCTCCA CCCAGCTGAT CAAGGATCAG TACGGAGTCA TCCGCCGCAC CGACATCGAC GCCATCGCCG CCGATCTGGG GGCCGGCACC CGCATCGTCT ACCTGCGCCC GGAAAAGGCC ACCGACGACC GGGTCGTCCG GGTGTCCGCG GCCGAGCAGA CCCTGCGCCG GCTGGCCGAC GAGCATGGCC TGATGGTGCA GATCGCCCTG ATCCCCGGCG GGCACCACGC CAGCGCGGAG AGCAACACCT CGGCCTATCT GGACGTTCTC GAATCGTTGC GAACCGTCCG CGGCAGCTGA
|
Protein sequence | MAPLSPVPPS EYDSPAVRAQ RRLDRARRRA RRRAAWWYSP MIIGCLLAGL WGLLKTDQYL ADQLFWPSAG AQFVPVGPDP DRADETGGPI VVVAGGLNRK SGTGPALALR PALTAGSDRD GQSPTRVFSL VYGSGINDRD IQDKFDALIS RTQPDRVDFF GSSMGGDVVL ALARHLRQSQ HDWRSSRAAE PTPDARPIPA QVRSGSTGPI PVTTFAGRAA GPDAATRTDT DTDGSTSGQP PAPPQLGTIY LDCTPLSVAD VRDSGRTQAD ALTGLSEALQ TDGGVGLRLT AEVLAQQRQW SAGRFPFVDV RWAELTDKVV QVWRDKIDGP GVSTQLIKDQ YGVIRRTDID AIAADLGAGT RIVYLRPEKA TDDRVVRVSA AEQTLRRLAD EHGLMVQIAL IPGGHHASAE SNTSAYLDVL ESLRTVRGS
|
| |