Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Namu_1806 |
Symbol | |
ID | 8447411 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nakamurella multipartita DSM 44233 |
Kingdom | Bacteria |
Replicon accession | NC_013235 |
Strand | - |
Start bp | 1981658 |
End bp | 1982839 |
Gene Length | 1182 bp |
Protein Length | 393 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 645040935 |
Product | UspA domain protein |
Protein accession | YP_003201185 |
Protein GI | 258652029 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0589] Universal stress protein UspA and related nucleotide-binding proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.0998568 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.120471 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGAATT CGCAGGCAGC GGGGTTGCGC GGAAGGGACG GCATCATGAC TTCGTCGGAG AACTACCGGG CCAACCGCGA GGCAATCAGC GATGTGGCCG CCCGCTCGGG CGGCGTGTCA CCGCACGATC GGGCCGTCGA GCGGTACCTC ATCGCTGCCC AGATCCGGGC CGGCCACCCC ATCGCCACCA CCACCGGGCC CACCGGGCCC ACCGGCCGGG CGGCAACCGT ACCGGAGGAT GCCAAGGCGG GCGATCCGCC CTCGGCGTCG ACCGAACCCG CGCCGCGGCT GCCCGACCAG CGCTTTCCCC GGGACGCGAT CGTGGTCGGT CTCGACGGGT CGGCCGGCGC CGATGCGGCC GCCGGCTGGG CGGCCGACGA GGCGGCACGG CGCCTGGCCC CGCTGCTGCT GGTGCACGCT TACCACCTGC CCACGGTCGG CGCCTACCCC GGTTACGACT TCGTGCCCAC CGACTACCTG GATCAGCTGC GGGCGGCCGG AGCCCGGCTG CTGGCCGACA CCGCGGACCA TCTGCGGGTC GTCCACCCGT CGATGACCGT CATGACCTCC CTGCATCACG GGTCCGCGGT GGTCGCGCTG CGCGAGGCGT CCGAGCACGC GCAGCTCACC GTCGTCGGCA ACGCTCCACC GTCCCGCTTC ACCGGCGTGC TGCTCGGCTC GGTCGCCCTG GCCGTCACGT CCAGCAATCC GGTCCCGGTG GCCGTCATTC CCAGCGGGTC GGCGCCGGCC CGCGGCCCGA TCGTGGTCGG GGTCGACGGT TCGCCGCTGA GCGAGGCCGC GGTCGGGTTC GCCTTCGACG AAGCCGCCCT GCGGGGCGTG GACCTGATCG CCGTGCATGC CTGGAACGAC GTGTATCTGG ACAACCAGGG TCTGCAGCCG CTGCTGGTCG ACCCGCGCAC GCTGGAGGAC CAGGAGCGGG CGCTGCTCAG CGAGCGACTG GCCGGCTGGG CCGAGAAGTA TCCCGATGTG GTGGTGCACC GGGAGCTTCG CCACCAGCGG CCCACGACCG CGCTGCTCGA ACACAGCCGC ACCGCGCAGC TGGTGGTTGT CGGCAGCCGC GGCCGAGGCG GGTTCTCCGG CATGTTGCTC GGTTCGACCA GCCACGCCCT AGCCTCCCAC GCGCACTGTC CGGTGATCGT CATCCGTCGG CCCTCCGCCT GA
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Protein sequence | MLNSQAAGLR GRDGIMTSSE NYRANREAIS DVAARSGGVS PHDRAVERYL IAAQIRAGHP IATTTGPTGP TGRAATVPED AKAGDPPSAS TEPAPRLPDQ RFPRDAIVVG LDGSAGADAA AGWAADEAAR RLAPLLLVHA YHLPTVGAYP GYDFVPTDYL DQLRAAGARL LADTADHLRV VHPSMTVMTS LHHGSAVVAL REASEHAQLT VVGNAPPSRF TGVLLGSVAL AVTSSNPVPV AVIPSGSAPA RGPIVVGVDG SPLSEAAVGF AFDEAALRGV DLIAVHAWND VYLDNQGLQP LLVDPRTLED QERALLSERL AGWAEKYPDV VVHRELRHQR PTTALLEHSR TAQLVVVGSR GRGGFSGMLL GSTSHALASH AHCPVIVIRR PSA
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