Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Namu_1801 |
Symbol | |
ID | 8447406 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nakamurella multipartita DSM 44233 |
Kingdom | Bacteria |
Replicon accession | NC_013235 |
Strand | + |
Start bp | 1976258 |
End bp | 1977379 |
Gene Length | 1122 bp |
Protein Length | 373 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | 645040930 |
Product | UspA domain protein |
Protein accession | YP_003201180 |
Protein GI | 258652024 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0589] Universal stress protein UspA and related nucleotide-binding proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.00612057 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.112863 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACCCGC TCGAGGAATC CCGGGCCGTC CACGAGGCGC AGCGTGGGGT GGTCACCCGA GCCGGTGGGG TGACCAGCCA TGAGCATGCG CTGCAGCAGT ACCTGGTCGC CGCGCAGTAC GGCGTGACCC GCGGCGATCG CCCGCAGCCG GACGCCGCCG CCCCGCCCGC GGCACCGCCG GCCGCCCAGA CCGTCGCCGA CGAGAGTTCG GACCGGACCG ACCGGCGGTC CGAGTACCCG GCGGGTGCCG TGGTGGTCGG CGTCGACGAC TCGGCCGGCG CCCGGGCGGC GGCTGCGTGG GGCGCCGACG AGGCGGTGCG GCGACACGCC CCGCTGGTGC TCGTGCACGC CTACCGGTTG CCGGCGACCG GCGGTTTCCC CGGCTACAAC CCGGTCCCGG ACGATCTGCT CGAACAGCTG CGGGCCGCGG GCGACCACCT GCTCCGGCGC ATCGGCGAGG AGGTGGCGGG CCGCCACCCG GACCTGCCGG TCGTCCGCTC GTTGGTCCAC GGCCGCGCCG AGGTGGCGTT GCGGGAGGCC TCCGGGCAGG CGCGATTGAC GGTCGTCGGC AACGCGCCGT CGTCCCGGGT GGCCGGTGCG TTGCTCGGTT CGGTGGCCCT GGCCGTGACG TCGTCGAATC CGGTTCCCGT CGCGGTGGTC CATGCCGGGC ACCAGGTGGC CGACGGACCG ATCGTCGTCG GCGTCGACGG GTCCCCGCTC AGCGAGGCGG CGGTGGCGTT CGCGTTCGAC GAGGCCGCCC TGCGCGGCGT CGAACTGGTT GCCGTCCATG CCTGGAACGA TGTCTACCTG GACTCCCGAC GGTTGGAGCC GCTGCTGATC GATCCGCAGA CCCTGCTGGA GCAGGAGCGG GCTCTGCTCG GTGAACGCCT CGCCGGGTGG GGGGAGAAGT ACCCGGACGT CCCGGTGCGG CAGGTCCTGC TGCATCAGCG ACCCGTGCAG GCGTTGCTGG GCTACGCCGA CTCCGCGGGC GCGATGGTCG TGGGCAGCCA CGGCCGCGGC GGGTTCGCCG GGATGCTGCT CGGGTCCACC GGACACGCGT TGGCCACCCA CGGCCAGTGC CCGGTGATCG TCGTCCGGAA CGCCGTCGAC CGGGCCCGCT GA
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Protein sequence | MNPLEESRAV HEAQRGVVTR AGGVTSHEHA LQQYLVAAQY GVTRGDRPQP DAAAPPAAPP AAQTVADESS DRTDRRSEYP AGAVVVGVDD SAGARAAAAW GADEAVRRHA PLVLVHAYRL PATGGFPGYN PVPDDLLEQL RAAGDHLLRR IGEEVAGRHP DLPVVRSLVH GRAEVALREA SGQARLTVVG NAPSSRVAGA LLGSVALAVT SSNPVPVAVV HAGHQVADGP IVVGVDGSPL SEAAVAFAFD EAALRGVELV AVHAWNDVYL DSRRLEPLLI DPQTLLEQER ALLGERLAGW GEKYPDVPVR QVLLHQRPVQ ALLGYADSAG AMVVGSHGRG GFAGMLLGST GHALATHGQC PVIVVRNAVD RAR
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