Gene Namu_1787 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNamu_1787 
Symbol 
ID8447391 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNakamurella multipartita DSM 44233 
KingdomBacteria 
Replicon accessionNC_013235 
Strand
Start bp1962743 
End bp1963720 
Gene Length978 bp 
Protein Length325 aa 
Translation table11 
GC content75% 
IMG OID645040915 
ProductSiderophore-interacting protein 
Protein accessionYP_003201166 
Protein GI258652010 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2375] Siderophore-interacting protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.00316265 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.123717 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAACCT TAGATAATGT CGAGGCCACG GTGGCGGTCG AGCCGGGTCG ACCGGCCTAC 
CGACCGTTCC TGGTGCGGGT CAGCCGGGTC TGCCGGCTCA GCCCGTCCTT TCGCCAGGTG
ACCTTCGCCG CGCCGGAGTT GCGTGAGTTC GGTGACGACG GTCTGGACCA GCGGATCAAG
CTGATCCTGC CGGAGGGGGC GCGCGGGTTG GACGGCCTGG GCATCGGAGC GGGGTCCTCC
GCCGACGCCC AGTGGTACGG GCGATGGCGC GCCTTGCCCG ACGAGCGCCG CCCGGCGCTG
CGCACCTACA CCGTGCGCCG CGCCCGGCCT CGCGACGCCG AGGTCGACGT CGTGCTGGTC
GATCACGAGT CGGCGCCGGG GACGGCAGGT CCGGCGATCC GTTGGCTGCG GGCGGCGGTG
CCCGGCGACC AGGTGGTGCT GGTCGGCCCG GATGCCCGCA GCCCGGACCG GCACCAGGGC
ATCGACTGGC GCCCCGGCGC GGCGACCCGG CTGCTCCTGG CCGGTGACGA GACGGCCGCA
CCGGCGATCG TGGGGATTCT GGAGAGTCTG GCCGGCCGCC CGGACGTGAG CGCCCGAGCG
TTCGTCGAGG TGCCCGACGG CCGCGATCGG CTGCCCGCGG AGGTGCCGGC CACTGCCCGT
ATCCAGTGGC TGGCCCGCGG ACCCCGGGCG ACCGGCGCGC TGCTCGGGCC GGCGGTCACC
GACTGGCTGG ACGGTCACGC CCGCTGGGTG GACGCGGTCC GGGTGGCCGG CGAGCAGCCC
CTGGAGGACG TCGACGTCGA CCGGGAACTG TTGTGGGACA GCCCGGATCC GGCCGGCCAG
GGGTTCTACG CGTGGATGGC CGGGGAGGCC GCCGCGGTCA AGGCGCTGCG CCGGGCGATC
GTCACCGACC GGGGCGTCGA CCGGCGGCAG GTCGCGTTCA TGGGGTACTG GCGGCGGGGG
CAGGCCGAGC GCAACTGA
 
Protein sequence
MQTLDNVEAT VAVEPGRPAY RPFLVRVSRV CRLSPSFRQV TFAAPELREF GDDGLDQRIK 
LILPEGARGL DGLGIGAGSS ADAQWYGRWR ALPDERRPAL RTYTVRRARP RDAEVDVVLV
DHESAPGTAG PAIRWLRAAV PGDQVVLVGP DARSPDRHQG IDWRPGAATR LLLAGDETAA
PAIVGILESL AGRPDVSARA FVEVPDGRDR LPAEVPATAR IQWLARGPRA TGALLGPAVT
DWLDGHARWV DAVRVAGEQP LEDVDVDREL LWDSPDPAGQ GFYAWMAGEA AAVKALRRAI
VTDRGVDRRQ VAFMGYWRRG QAERN