| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Namu_1783 |
|---|
| Symbol | |
|---|
| ID | 8447387 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nakamurella multipartita DSM 44233 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013235 |
|---|
| Strand | + |
|---|
| Start bp | 1958413 |
|---|
| End bp | 1960080 |
|---|
| Gene Length | 1668 bp |
|---|
| Protein Length | 555 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 645040911 |
|---|
| Product | protein of unknown function DUF853 NPT hydrolase putative |
|---|
| Protein accession | YP_003201162 |
|---|
| Protein GI | 258652006 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0433] Predicted ATPase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.000734669 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.0773892 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGACGACAC CAGCAGCGGC GGCGGAGCAG GCCGCCCAGC GCATCGCACA CGGATATGAC
ACGACAGCGC CGGCCGTCGT GGTCGGGTCG GTGGTCATCG ACCAGACGGC CGAACCCACC
GCCCTGGTCC GGATCCCGCT GTCCATGTTC AACCGGCACG GCCTGGTCGC CGGCGCGACC
GGCACCGGCA AGACCAAGAC CCTGCAGGTG CTCGCCGAGC AGCTGTCCGC GGCCGGCGTC
CCGGTCTTCA TGCCTGACAT CAAAGGCGAC CTGACCGGGT TGGCCGTTTC CGGCGAACCC
AACGCCAAGA TCCAGCAGCG GGCCCGGGAC ACCGGCGACG ACTGGGCGCC GGCCACCGTT
CCGGTCGAGT TCCTCAGCCT GAACGGTCAG GGCACGGCCA TCCCGGTGCG GGCCACGATC
GACTCGTTCG GACCCATCCT GCTGTCCAAG GTGCTGGGCC TGAACGAGAC CCAGGAGTCC
ACCCTCGGGT TGATCGTGCA CTGGGCCGAC CAACGCAACC TGCCGCTGCT GGACCTGAAG
GACCTGCGCG CGGTGATCAT GCACCTGACC AGCGACGAGG GGAAGGAGGA CCTGCGCGGG
CTGGGTGGGG TGTCCAAGGC CACCGCCGGA GTCATCCTGC GGGCGGTCAC CAACCTCGAC
GCCCAGGGCG GCGACCGCTT CTTCGGTGAA CCCGAGCTGC AGGTCGAGGA CCTGCTGCGG
GTGGGCGCCG ACGGCCGCGG GATCGTCACC CTGTTCGAGG CCTCCGGGCT GCAGACCAAC
CCGGCCCTGT TCTCCACCTT CCTGATGTGG CTGCTGGCCG AGTTGTTCGA GCAGCTGCCC
GAGGTCGGCG ACGTCGACAA GCCCAAGCTG GTGTTCCTGT TCGACGAGGC GCATCTGCTG
TTCGCCGACG CATCCAAGGC GTTCCTGCAG GCCGTGCAGC AGACGGTCAA ACTCATCCGG
TCCAAGGGTG TCGGGGTGTT CTTCTGCACC CAGCTGCCCA CCGACGTGCC CGCCGCCGTG
CTCTCCCAAC TGGGCGCGCG GATCCAGCAC GCCCTGCGCG CATTCACCCC GGACGACCAG
AAGGCGCTCA AGGCCACGGT CAAGACGTAC CCGATCACCC AGGACTACGA CCTGTCGGCG
GCGTTGACCT CGCTGGGCAC CGGCGAGGCG ATCGTCACCG TGCTGTCCGA AAAAGGCTCG
CCCACCCCGG TCGCCTGGAC CCGGGTGCGC GCCCCGCGGA CATTGATGGC GCCGGCGCCG
CCGGCGACCG TCGCCGCCGC GGTGGCCGCC TCACCACTGT TCGCCCGGTA CGGATCGGAC
GTCGACCGCG AGTCGGCCTA CGAGATGCTC ACCGCGCGGC TCGCCCCGCC CGCCCCGACC
CCGAGCGCGC CGGCCCCGAG CGCGCCGGCA CCCTCGGGGT CCGCCGCGCC GCCGGCGCCC
TCGCTCGGGC CCGACGGCTG GCCGAGCCTG ACCCCGGAGC CGTACAACCC CTACCTGGAC
GAGCCGGCGC CGCCAACCAC CCGGTCGCAG CCCTCGCCCG GATCGGGCAG CGGTCTGGGG
GAGGTGCTGA GCAACCCGGC GGTCACCTCC TTCATGAAAT CGCTGGGCAG TTCGCTCGGC
GGGGCACTGG GCCGGTCGGT CTTCGGCACC CGCAAACGGC GCCGCTGA
|
|---|
| Protein sequence | MTTPAAAAEQ AAQRIAHGYD TTAPAVVVGS VVIDQTAEPT ALVRIPLSMF NRHGLVAGAT
GTGKTKTLQV LAEQLSAAGV PVFMPDIKGD LTGLAVSGEP NAKIQQRARD TGDDWAPATV
PVEFLSLNGQ GTAIPVRATI DSFGPILLSK VLGLNETQES TLGLIVHWAD QRNLPLLDLK
DLRAVIMHLT SDEGKEDLRG LGGVSKATAG VILRAVTNLD AQGGDRFFGE PELQVEDLLR
VGADGRGIVT LFEASGLQTN PALFSTFLMW LLAELFEQLP EVGDVDKPKL VFLFDEAHLL
FADASKAFLQ AVQQTVKLIR SKGVGVFFCT QLPTDVPAAV LSQLGARIQH ALRAFTPDDQ
KALKATVKTY PITQDYDLSA ALTSLGTGEA IVTVLSEKGS PTPVAWTRVR APRTLMAPAP
PATVAAAVAA SPLFARYGSD VDRESAYEML TARLAPPAPT PSAPAPSAPA PSGSAAPPAP
SLGPDGWPSL TPEPYNPYLD EPAPPTTRSQ PSPGSGSGLG EVLSNPAVTS FMKSLGSSLG
GALGRSVFGT RKRRR
|
|---|
| |