Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Namu_1762 |
Symbol | |
ID | 8447364 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nakamurella multipartita DSM 44233 |
Kingdom | Bacteria |
Replicon accession | NC_013235 |
Strand | + |
Start bp | 1928532 |
End bp | 1929968 |
Gene Length | 1437 bp |
Protein Length | 478 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 645040888 |
Product | OmpA/MotB domain protein |
Protein accession | YP_003201141 |
Protein GI | 258651985 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.000778911 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.308446 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGGGCAC ACGAGCGGTT CTCCGCGGTC CCGGATCACC GCTCGGAGCG CGCGGCCGGT CGGCCGGCCT CGGCGGTGCT GCGGTGGCAA CGTTCCGCGG GCAACGCCGC GGTGGCCGGC GTCCTGCAAC GCGCCGCCGG GCGCGAGGTG GTGAGCCGGG ACGCGGCGGG CGCGGTCGCC GCGTCCCCCG TCGAGGGGTT GGCCACCAAG GCCGGCAGCC CGGCCGGCCT GCGCGCCATG CTGGCCGCCA ACCCGGGGTT GGCTCAGCAG GTCGTCAGCT GGTTCGCCGC CGGGAACGTC GACGAGTCGC TCAACGCGAT GCTGGGTGAG GCGTTCTCGC CCGCCGCCGC CCGGCAACAG CAGCAAGCAC CCGGCGGCGC ATCCGGAACG GGGCCGACCG CCCCGACCGA TCCCAGCGGC GCCGGTGCGC CGGAGAAGGC GCCCAAGGAC CCCACCCTGC CGTTACCGCC GGCGCTGACG GGGACCAAGA CCCTGCTCAA GGGTGACCTC ACCTGGACGC TGGCCCCGGC CAATCACCAG AGCGCGCGGA TCGACCTGGA CTTCAAGCCC GACGCGACCA AGGTCGACGC GAAGACGGTC AGCTACGGGC AGACGGTGAT CAACAAGATC GGCTCCGACC TGGCCTATGC CGGTGGGACC GAGGCCGACC CGGCCCGCAA CAAGGCCAAG TTCCAGCCGT TCGAGGATCC GACCTCCAAG CACCGTATCG ATCACCTCGT CGACACCGAG AACGACCCCT TCTACGGAGC GGAATGGGAC CAGGCGACCA AGTCCTGGGC CAACGAGTCG CCCGGGCGGC GGGTCGGGGC ATCGTCGACC AAGACCGGGG TGTCGACCTC GGCGACGATG GACGACACCC CGGAGGCGCC CGCGCCCCGC GCCGGAAAGG GCGACTCGGA GCTGTCGTTC GAATCGGTGC CGATGGTGCT CGAGACGCGC GAGCCGTTGG GCGCGATCCT GTGGGGCTTC AAGATCGAGG ACAAGGAGAA CGCGCCGATC GTGCTCACGG GCGCCAAGGA CGCGGACGTG ACCGATACGC CGTCGGCGGC CTGGGGCGCC ACGATGGATC AGTACTACGC CGCGAAGTAC GCTGAGATCC TCGACGACTT CGACATCGGC AAGGCCGATC TCAAGGACGC GCACAAGACC CAGCTGGACT CCGTGGTGAC CAAGCTGCAG GGCAACGCCG CGCTGCGCGC CCAACTCGGG GGAGCGGCGG ATCTCACCGG CGGGGCGAAG GTGAACATGG CGCTGAGTCT GAAGCGGGCC GAGAATGCCC GGGATTACCT GGTCTCCAAG GGCATCGACG CCGCGCGCCT GGAGGTGCAG AGCTACGGCG CCGACTGGGC CCGGGTCGCG ACCACGACCG GTACCAATGA AAGCAAGAAT CGCCGGGTCC AGGTGTGGGT GCACTGA
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Protein sequence | MRAHERFSAV PDHRSERAAG RPASAVLRWQ RSAGNAAVAG VLQRAAGREV VSRDAAGAVA ASPVEGLATK AGSPAGLRAM LAANPGLAQQ VVSWFAAGNV DESLNAMLGE AFSPAAARQQ QQAPGGASGT GPTAPTDPSG AGAPEKAPKD PTLPLPPALT GTKTLLKGDL TWTLAPANHQ SARIDLDFKP DATKVDAKTV SYGQTVINKI GSDLAYAGGT EADPARNKAK FQPFEDPTSK HRIDHLVDTE NDPFYGAEWD QATKSWANES PGRRVGASST KTGVSTSATM DDTPEAPAPR AGKGDSELSF ESVPMVLETR EPLGAILWGF KIEDKENAPI VLTGAKDADV TDTPSAAWGA TMDQYYAAKY AEILDDFDIG KADLKDAHKT QLDSVVTKLQ GNAALRAQLG GAADLTGGAK VNMALSLKRA ENARDYLVSK GIDAARLEVQ SYGADWARVA TTTGTNESKN RRVQVWVH
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