| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Namu_1729 |
|---|
| Symbol | |
|---|
| ID | 8447331 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nakamurella multipartita DSM 44233 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013235 |
|---|
| Strand | - |
|---|
| Start bp | 1891590 |
|---|
| End bp | 1893179 |
|---|
| Gene Length | 1590 bp |
|---|
| Protein Length | 529 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 645040855 |
|---|
| Product | Methylcrotonoyl-CoA carboxylase |
|---|
| Protein accession | YP_003201108 |
|---|
| Protein GI | 258651952 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG4799] Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.0231306 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.068906 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGGGCG CCATGACCGA TACCCCGACC CCCACCGCGG ACGGCGGCCC GGCCCCGGTG
GCGTCCCTGC CCGAACTGGT CGACGAACTG CGCACCCGGC TGGCGGTCGT GCGTCAGGGT
GGCAGCGAAG CCGCCCGGCG CAAGCACACC GACCGCGGCA AGCTGCTGGC CCGCGACCGG
GTCGACCGGT TGCTCGACCC GGGCAGCCCG TTCCTGGAAC TGGGCGCGTT GGCGGCCTAC
GAGATGTACG GCGGCGCCGT CCCCAGTGCC GGCATCGTCA CCGGCATCGG CCGGGTCAGC
GGCCGCGAGG TCGTCGTGGT CGCCAACGAC GCCACGGTCA AGGGCGGCAC CTACTACCCG
ATGACGGTCA AGAAGCACCT GCGCGCGCAG ACCGTAGCCG GCGAGAATCA TTTGCCCTGC
ATCTATCTGG TCGACTCCGG CGGCGCCTTC CTGCCGATGC AGGACGAGGT CTTCCCCGAC
CGCGAGCACT TCGGGCGGAT CTTCTACAAC CAGGCCACGC TGTCCGCCCG CGGCATCCCG
CAGATCGCCA GCGTGATGGG GTCGTGCACG GCCGGCGGCG CCTACATGCC GGCCATGTCC
GACGAGACGG TCATCGTCCG CAACCAGGGC ACCATCTTCC TCGGCGGGCC GCCGCTGGTG
AAGGCGGCGA CCGGCGAGAT CGTCACCGCC GAGGACCTGG GCGGCGGCGA CGTGCACGCC
CGGATCTCCG GGGTCGTCGA CCATCTCGCG CAGGACGACG CGCACGCGCT GGCCATCGTC
CGCAGCATCG TGGGCACCCT GCACCGGCCG GTCGTGACCC CGGCCTACGA CCTGGCGCCG
GTGGAGGAAC CGCACGAGGA CCCGGCCTCG CTCCACGACG TGGTGCCGGC CGACACCCGC
ACCCCCTACG ACGTGCGCGA GGTGATCCGG CGCATCGTCG ACGGCAGCCG GCTGCACGAG
TTCAAGAAGC TCTACGGCCA GACCCTGGTC TGCGGGTTCG CCCACATCTG GGGGCATCCG
GTCGGCATCG TGGCCAACAA CGGCATCCTG TTCAGCGAAT CCTCGCTCAA GGGAGCGCAT
TTCATCGAAC TGTGCAACCA GCGCGGCATC CCGTTGGTGT TCCTGCAGAA CATCACCGGG
TTCATGGTCG GCCGGCAGTA CGAGAACGGC GGCATCGCCA AGGACGGCGC CAAACTGGTC
ACCGCGGTGG CCTGTTCGGT GGTGCCCAAG TTCACCGTCG TCATCGGCGG GTCGTTCGGC
GCCGGCAACT ACGGCATGTG CGGGCGCGCC TACGATCCCC GGTTCCTGTG GATGTGGCCG
AACGCCCGGA TCTCGGTGAT GGGCGGCGAG CAGGCCGCGT CCGTGCTGGC CACCGTGCGC
GGCTTCGACG ACCCGCAGGA GGAGGAGGCC TTCAAGGCGC CGATCCGGGC CCAGTACGAG
CAGCAGGGCT CGCCCTACTA CTCCACCGCC CGGCTGTGGG ACGACGGCAT CATCGACCCG
GCCGACACCC GCCGGGTGCT CGGCCTGGGC CTGGCCGCCG CGGCCAACGC CCCCACCCCC
GCGCCGTCCT ACGGCGTCTT CCGGATGTGA
|
|---|
| Protein sequence | MTGAMTDTPT PTADGGPAPV ASLPELVDEL RTRLAVVRQG GSEAARRKHT DRGKLLARDR
VDRLLDPGSP FLELGALAAY EMYGGAVPSA GIVTGIGRVS GREVVVVAND ATVKGGTYYP
MTVKKHLRAQ TVAGENHLPC IYLVDSGGAF LPMQDEVFPD REHFGRIFYN QATLSARGIP
QIASVMGSCT AGGAYMPAMS DETVIVRNQG TIFLGGPPLV KAATGEIVTA EDLGGGDVHA
RISGVVDHLA QDDAHALAIV RSIVGTLHRP VVTPAYDLAP VEEPHEDPAS LHDVVPADTR
TPYDVREVIR RIVDGSRLHE FKKLYGQTLV CGFAHIWGHP VGIVANNGIL FSESSLKGAH
FIELCNQRGI PLVFLQNITG FMVGRQYENG GIAKDGAKLV TAVACSVVPK FTVVIGGSFG
AGNYGMCGRA YDPRFLWMWP NARISVMGGE QAASVLATVR GFDDPQEEEA FKAPIRAQYE
QQGSPYYSTA RLWDDGIIDP ADTRRVLGLG LAAAANAPTP APSYGVFRM
|
|---|
| |