| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Namu_1616 |
|---|
| Symbol | |
|---|
| ID | 8447215 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nakamurella multipartita DSM 44233 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013235 |
|---|
| Strand | + |
|---|
| Start bp | 1784616 |
|---|
| End bp | 1785230 |
|---|
| Gene Length | 615 bp |
|---|
| Protein Length | 204 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 645040741 |
|---|
| Product | bifunctional deaminase-reductase domain protein |
|---|
| Protein accession | YP_003200997 |
|---|
| Protein GI | 258651841 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0262] Dihydrofolate reductase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 0.363546 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.130243 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGCAAGC TGATCGTCAC CGAGTTCATG ACGTTGGACG GCGTCGCGCA GGCCCCGGGC
GGACCGGACG AGGACCGCGA GAGCAGCTTC GAGCACGGGG GCTGGCAATG GCCGGTCTCG
GACCCGGAGT CCGGCGAGGT GATGTACCAG GAGGCCAGCA GCATGAAAGC GCTGCTGCTG
GGCCGCAAGA CCTACGACAT CTTCGCCCAG TACTGGCCCC AGGCGCCGGC CGAGATGCCG
TTCACCGCAC TGCTGAACAG TGTTCCCAAG TACGTGGCCA GCCGCACCCT GGCCGAGCCG
CTCAACTGGT CCGGATCGAC CTTGCTCAGC GGTGATTTCG GCGAGAGCAT CACCGCCCTG
AAGCAGCGCT ACGACGAGGT GCAGGTGATC GGCAGCCTGG ACATGGTGCA GTCCCTGCTG
CGGCTGGGCC TGGTCGACAC GATGAATCTG TGGGTGTACC CGTTGGTCTT GGGCACCGGC
AAGAAGGTCT TCGACGGCGG GACCGTGCCC ACCGCGCTGC GTCTGACCGC CTCGCAGATC
TACCCGGGCG GGGCCGCGCA CCTGACGTAC GAGACGGCCG GCGCACCCAC CTACGCCACG
ATGCCCGACG AGTAG
|
|---|
| Protein sequence | MGKLIVTEFM TLDGVAQAPG GPDEDRESSF EHGGWQWPVS DPESGEVMYQ EASSMKALLL
GRKTYDIFAQ YWPQAPAEMP FTALLNSVPK YVASRTLAEP LNWSGSTLLS GDFGESITAL
KQRYDEVQVI GSLDMVQSLL RLGLVDTMNL WVYPLVLGTG KKVFDGGTVP TALRLTASQI
YPGGAAHLTY ETAGAPTYAT MPDE
|
|---|
| |