| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Namu_1571 |
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| Symbol | |
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| ID | 8447169 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nakamurella multipartita DSM 44233 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013235 |
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| Strand | + |
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| Start bp | 1732592 |
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| End bp | 1733614 |
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| Gene Length | 1023 bp |
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| Protein Length | 340 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 645040698 |
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| Product | heat-inducible transcription repressor HrcA |
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| Protein accession | YP_003200955 |
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| Protein GI | 258651799 |
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| COG category | [K] Transcription |
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| COG ID | [COG1420] Transcriptional regulator of heat shock gene |
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| TIGRFAM ID | [TIGR00331] heat shock gene repressor HrcA |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 0.27159 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.00683488 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTCGGCCG ACGACAGGCG GTTCCAGGTC CTGCGCGCGA TCGTCGCCGA CTACGTCGCC
ACGCATGAGC CGGTCGGGTC CAAGTCGCTG GTCGAACGGC ACCAACTCGG CGTCTCCCCG
GCCACCATCC GCAACGACAT GGCCGCCCTG GAGGACGAGG GCTACATCGC CCAGCCGCAC
ACGTCGGCCG GCCGCATCCC CACCGACAAG GGCTACCGGC TGTTCGTCGA CCGGCTGTCC
CAGGTCAAGC CGCTCTCGGC CGGGGAGCGC CGGGCGATCC AGGCGTTCCT GTCCGAGGCC
GTCGACCTGG AGGACGTGCT GCGCCGCTCG GTGCGGTTGC TGGCCCAGCT GACCCGGCAG
GTCGCGTTCG TGCAGTACCC GACGCTGTCC CGGTCCTCGG TCCGGCACGT CGAGGTCGTC
ACGCTGGACC GGCGCCGGCT GCTGCTGGTG GTCATCACCG ACACCGGCCG GGTCGAGCAG
CGCCTGGTCG AGCTGGACAC CGACGTCACC GACGAGGGAC TGCTGGCCCT GCGCACGCTG
TTCGCGACCG CGGCTGTCGG CCGCCGGCTG GGCGACGCGG CCTCGGCCCT GACCGACGCC
GCCGCCACCG TCGATCCGGA CGTCCGACCG CTGGTGGTGC CCTCGGTGGC CGTGCTGCTG
GACTCGCTGG TCGAGCACCC CGAGGAGCGG CTGGTGCTCT CGGGCACCTC GCACGCGACC
GGCGCCTGGG CCGATCAACC GGGGGCCCTG CGGGGCGTCC TGGAAGCGTT GGACGAGCAG
GTCACCTTGC TCAAGCTGCT GGCCGCGCTG GAGACTCCCG ATGCGGTGGT CGTCTCCATC
GGCAGCGAGA ACGACGACGC GAACCTGTCC ACGACGGCAC TGGTGTCCGC CGGGTACGGC
AGCGGGCAGA CGCTGATGGG CGGTTTGGCC GTCGTCGGAC CGACTCGGAT GGACTATCCG
GGGACGATGG CGGCGGTTCG GGCGGTCGCC CGGTACGTCG GGGAGATCGT CGCCGGCCGG
TAG
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| Protein sequence | MSADDRRFQV LRAIVADYVA THEPVGSKSL VERHQLGVSP ATIRNDMAAL EDEGYIAQPH
TSAGRIPTDK GYRLFVDRLS QVKPLSAGER RAIQAFLSEA VDLEDVLRRS VRLLAQLTRQ
VAFVQYPTLS RSSVRHVEVV TLDRRRLLLV VITDTGRVEQ RLVELDTDVT DEGLLALRTL
FATAAVGRRL GDAASALTDA AATVDPDVRP LVVPSVAVLL DSLVEHPEER LVLSGTSHAT
GAWADQPGAL RGVLEALDEQ VTLLKLLAAL ETPDAVVVSI GSENDDANLS TTALVSAGYG
SGQTLMGGLA VVGPTRMDYP GTMAAVRAVA RYVGEIVAGR
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