Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Namu_1547 |
Symbol | |
ID | 8447145 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nakamurella multipartita DSM 44233 |
Kingdom | Bacteria |
Replicon accession | NC_013235 |
Strand | - |
Start bp | 1707329 |
End bp | 1708768 |
Gene Length | 1440 bp |
Protein Length | 479 aa |
Translation table | 11 |
GC content | 81% |
IMG OID | 645040674 |
Product | protoporphyrinogen oxidase |
Protein accession | YP_003200931 |
Protein GI | 258651775 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG1232] Protoporphyrinogen oxidase |
TIGRFAM ID | [TIGR00562] protoporphyrinogen oxidase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.361545 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.242049 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGCTGGGCG CCGGCCTCGC CGGCCTGAGC GCCGCCCTGG ATCTGGCCCG GGCCGGGCTG CGCCCGCTGG TCCTGGAGGC CGCGGCGCGG GCCGGCGGGG TCGTCTGCGC GCACACCGTG GGCGGGCTCG ACCTGGACGC CGGCGCCGAA TCGTTCGCGG TGGCCCGCCC GGCCACCGCC GCCCTGATCG ACGAGCTGGG ACTGACCGAC CGGGTGCGCC AGCCCTCACC GGTGGGCGCC TGGGTCCGGC ACGCCGGCGG CGCCGCGCCG CTGCCGGCCC TGGCGTTCCT GGGCATCCCA GGCCGACCCT TCGCCGCCGA CGTGCGCCGG GTGATCGGGC TGCCGGGCGC CCTGCGGGCC GGCGCCGACC GGCTGCTCCC GGTTCGCGGG CCGGACCGCT CGCTGGGCGC CCTGGTCCGG ACCCGGATGG GCCGGCGGGT GCTGGAACGG CTGGTCGAAC CGGTGGCCGG CGGCGTCTAC GCGGCCGACC CGGACGTCCT GGACATCGCC ACCGTCGCCC CCGCCCTGCC CGCCGCCCTG GCCGAGGCCG GCTCGCTGGC CGGGGCCGCC CGGCAGCTGC GCGGCGCCGG CGGCCGGCCC GGGTCGGCGG TGGCCTCGCT CGAGGGTGGG CTGCACACCC TGGTGCCCGC GCTGGTCGCC GCGGTCACCG CGGCCGGCGG CACCGTGCGC ACCGGGGTCC GGGTGACCGG ACTGACCGGG CTGTCCGGGC TGACCGACGG CTGGCAGGTC CACACCGACG CCGGAACCGT GCCGGCCCGG CACGTCCTGC TGGCCCTGCC CGCCCCGGTG ACCCGCGAGC TGATGCCCGA CCGGATCGAC CACGCGCTGA CGGCAGCGCT GGACCAGCCG GTCGCCCCGG TCGCCCTGGT CACCTTGGTG CTCGACGACG AACGCCTGGA CGCCGCCCCG CGGGGCACGG GCATCCTGGT CGCCCGCCGG GCCCGCGGGC CCGGGGCCAA GGCGCTGACC CATGCCACCG CCAAGTGGCC CTGGTTGGCC CGGGCCGCCG GCCCCGGCCG GCACGTGCTG CGCCTGTCCT ACGGCCGCGG CGCCGGCGAG GTGCTCCCCG GCGACGCCGA GCTGCCCGCG CTGGCCCTGG CCGACGCCGG CGAACTGCTC GGAGTGCCGC TGCGCCCCGG TGACGTCGTC GGCACCGCCG TCGTGCGCTG GGACTCGGCC CTGCCGGTGC CCCGGCCGGG CCACGCGGCC GCGGTGGCCG CCCTGCGCGC CGCCGCCGCG CCGGCGGGGC TGACCGTGGT CGGCTCGGCG ATGGCCGGCA CCGGCCTGGG CGCCGTCATC GCCGACGCCC GCGGCCAGGC CGCCGCGCTG ATCGCCAGCC TGACCGCCGC CGGCTGTGGC CAGTTCAACG CGACCGGAGG GCCGGGCGCG GGCCCCGGTC GGGCAGGATG GTCTGCGTGA
|
Protein sequence | MLGAGLAGLS AALDLARAGL RPLVLEAAAR AGGVVCAHTV GGLDLDAGAE SFAVARPATA ALIDELGLTD RVRQPSPVGA WVRHAGGAAP LPALAFLGIP GRPFAADVRR VIGLPGALRA GADRLLPVRG PDRSLGALVR TRMGRRVLER LVEPVAGGVY AADPDVLDIA TVAPALPAAL AEAGSLAGAA RQLRGAGGRP GSAVASLEGG LHTLVPALVA AVTAAGGTVR TGVRVTGLTG LSGLTDGWQV HTDAGTVPAR HVLLALPAPV TRELMPDRID HALTAALDQP VAPVALVTLV LDDERLDAAP RGTGILVARR ARGPGAKALT HATAKWPWLA RAAGPGRHVL RLSYGRGAGE VLPGDAELPA LALADAGELL GVPLRPGDVV GTAVVRWDSA LPVPRPGHAA AVAALRAAAA PAGLTVVGSA MAGTGLGAVI ADARGQAAAL IASLTAAGCG QFNATGGPGA GPGRAGWSA
|
| |