Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Namu_1522 |
Symbol | |
ID | 8447120 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nakamurella multipartita DSM 44233 |
Kingdom | Bacteria |
Replicon accession | NC_013235 |
Strand | - |
Start bp | 1679724 |
End bp | 1680629 |
Gene Length | 906 bp |
Protein Length | 301 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 645040652 |
Product | transcriptional regulator, RpiR family |
Protein accession | YP_003200909 |
Protein GI | 258651753 |
COG category | [K] Transcription |
COG ID | [COG1737] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.0181901 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGACACTG TCCCCATGAC CAGCACCGGG GCGGGCAACC TGCTGCACGA GATCGCGAGC CGGATGCCGT ACATGGCGCC GGCGATGCGG CAGATCGCCG AACTGGTGCT CGGCGATCCG GAGCGGGCCC GCACCATGAC CATCACCGAG TTGTCCGACG CGGCCGGCGT GGCCGACTCG ACAGTGTCCC GGTTCGTCCG GGAACTGGGC CTGGACGGTT ACCGCTCGTT GCGGCTAGGC ATCGCCGAGG CAACGTTCGC GACGCGGGCC GCGGCGGCCG GCCCGGAGAC GCAGTACGTC TACGAGGGGA TCAGCCGGGA CGAACCACCG GACTCGGTGA TCGGCAAGGT CGAACGCAGC AGCGCCGAGG CGCTGCGACA GACCGCCCAG CGACTGCATC CGGAGGCCCT GTCGGCGGCC GTCGATCTGA TCGAGAACGC CTCCGTCATC GCGTTTGTCG CGCAAGGATT GTCCAGCGTG GCGGCCGACG CCGGGGTCAT GCGATTCATC CGCGCGGGCC GCAAGTGCCT GCTGTTCCAC GACCAGAGCG TGCAGATCAT GTCCGCGACC AACCTCACCG CGGGCGACGT GGTCATCGGG ATCAGCGACT CCGGCCGCAC CGACGCGATC GTCGACACGA TGCGGATCGC GCGCTCGCAC GGTGCGGCCA CGATCGCCGT CACCTCCGAC GCCGACTCAC CACTGGTCGG GGTCGCGGAC GTGGCCCTGT TCACCGCGAC CATCCCCGGC GGTGGCCTCT ACGGCGAGTC GGTCACCTCC AAGTGGGGCC AGCTGCTGGT CATCGACGCC CTGTACGCCA CGTTCGCGGC CCGCCGGTTC GACCAGACCC TCGAGCATCT CGAGGAGACC TACACCGCCG CGATCCAGCA CTCCCGCATG GCGTAA
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Protein sequence | MDTVPMTSTG AGNLLHEIAS RMPYMAPAMR QIAELVLGDP ERARTMTITE LSDAAGVADS TVSRFVRELG LDGYRSLRLG IAEATFATRA AAAGPETQYV YEGISRDEPP DSVIGKVERS SAEALRQTAQ RLHPEALSAA VDLIENASVI AFVAQGLSSV AADAGVMRFI RAGRKCLLFH DQSVQIMSAT NLTAGDVVIG ISDSGRTDAI VDTMRIARSH GAATIAVTSD ADSPLVGVAD VALFTATIPG GGLYGESVTS KWGQLLVIDA LYATFAARRF DQTLEHLEET YTAAIQHSRM A
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