Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Namu_1386 |
Symbol | |
ID | 8446982 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nakamurella multipartita DSM 44233 |
Kingdom | Bacteria |
Replicon accession | NC_013235 |
Strand | + |
Start bp | 1531064 |
End bp | 1532617 |
Gene Length | 1554 bp |
Protein Length | 517 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 645040518 |
Product | transposase IS4 family protein |
Protein accession | YP_003200777 |
Protein GI | 258651621 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.00661518 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
| |
Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.00725427 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | GTGCAGGGTC GGTCGCGGGA TCAGCGTGAG TTGTTGGATG CCGAGTCGGT AGTCGGTGGG CTGCTCAAGC CGGGCAGCGT GTTCGCGTTT CTGGCCGCGC ACCGTCGGGA GGTGTTCCCG GACGGCATGT TCGCGGATCT GTTTCCGTCG GGTCGGGGCC GCCCGTCAGT GCCGGCCGAC GTGATGGCGT CGGTGATTGT GCTGCAGGCT CTGCACGGCC TGTCCGACGC GGACACGGTG GACTCGGTGA CGTTCGATCT GCGGTGGAAG GCAGCGTGCG GGTTACCGGT GACCGCTGCG GCGTTCCATG CCACGACATT GACGTACTGG CGGCGTCGGC TGGCCGCTTC GCAGTCGCCG AACCGGATCT TCGACGCGGT CCGCCAGGTC GTGGACCAGA CCGGGGTGCT GGCTGGAAAG AGCAGGCGAG CGTTGGATTC CACGATCCTG GACGACGCGG TCGCCACCCA GGACACGGTC ACCCAGTTGA TCGCGGCGAT CCGCCGGGTC CGCCGCGAGG TACCCGGCGC CGCCGAGGTC GTCGGCGAGC ACTGCTCGGC TCACGACTAT GACGACCCGG GCAAACCGGC GATCGCCTGG AACGATCAGC AGGCCCGCGA GGCCCTTGTC GATGCGCTGG TCACCGACGC GCATCGGGTG CTGGGACACC TGCCCGACCA GGAGCTCGGA CCGAAGGCGG CGGACGCGGT CGCCCTCTTG GCGTTGGTCG CCGGGCAGGA CGTGGAACCG GTCGAGGGCT CGGACGGCAC CGACGGACGG TGGCGGATCG CGCAGCGGGT CGCCCCGGAC CGGGTGATCT CCACCGTGGA CCCGGAGGCG CGGCACGCCC ACAAGACCGT CCACCGGCGG CAGGACGGGT TCAAGGCACA CATCGCGGTC GAACCCGACA CCGGTCTGGT CACCGCCTGC GCGGTGACCA TGGCCAGCGG ACGCGGCAAC AGCGACGCCG AGGTTGGACC CACCTTGCTG GCACAGGAGA CCGAAAAGCT GCACGTGCTG GCCGATTCGG CGTACGGATC GGGATCCGCG CGGGCCGAAC TGGACCATGC CGGGCACATC GCGTTGATCA AGCCGTTCCC GCTGCGGTCG GCCGTGCCGG ACGGGTTCAC CCTGGACGAC TTCACCGTCG ACCCCGAGGC CAGGACGGCC ACCTGCCCGA ACGGGGTGAC CCGGTCGATC ACCGCGCAAT GGTCCGTCAC CTTCGGAGCG GCTTGCCGCG GCTGCCCGCT CCGGGCCCAA TGCACGACCA GCGACGCCGG TCGATCGCTG AAGCTGACCG AGTACGAAAG CCTGCTCAGG GCGGCCCGTC GACAAGCGGA AACCGAGGAC TTCCAACAGG TCTACCGACG GCACCGGCCG ATGGTCGAAC GATCGATCTC CTGGCTGGTC CGCGGCAACC GCAAAGTCCG CTACCGCGGC GTCGCCAAGA ACGACCACTG GTGGCACCAC CGCGCCGCTG CGATCAACCT CAGGCGAATG CTCACCCTCG GGCTGACGCG GGTGAGCGGG ACGTGGACCA TTGCACCGGC CTGA
|
Protein sequence | MQGRSRDQRE LLDAESVVGG LLKPGSVFAF LAAHRREVFP DGMFADLFPS GRGRPSVPAD VMASVIVLQA LHGLSDADTV DSVTFDLRWK AACGLPVTAA AFHATTLTYW RRRLAASQSP NRIFDAVRQV VDQTGVLAGK SRRALDSTIL DDAVATQDTV TQLIAAIRRV RREVPGAAEV VGEHCSAHDY DDPGKPAIAW NDQQAREALV DALVTDAHRV LGHLPDQELG PKAADAVALL ALVAGQDVEP VEGSDGTDGR WRIAQRVAPD RVISTVDPEA RHAHKTVHRR QDGFKAHIAV EPDTGLVTAC AVTMASGRGN SDAEVGPTLL AQETEKLHVL ADSAYGSGSA RAELDHAGHI ALIKPFPLRS AVPDGFTLDD FTVDPEARTA TCPNGVTRSI TAQWSVTFGA ACRGCPLRAQ CTTSDAGRSL KLTEYESLLR AARRQAETED FQQVYRRHRP MVERSISWLV RGNRKVRYRG VAKNDHWWHH RAAAINLRRM LTLGLTRVSG TWTIAPA
|
| |