Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Namu_1345 |
Symbol | |
ID | 8446941 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nakamurella multipartita DSM 44233 |
Kingdom | Bacteria |
Replicon accession | NC_013235 |
Strand | - |
Start bp | 1484578 |
End bp | 1485279 |
Gene Length | 702 bp |
Protein Length | 233 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 645040478 |
Product | transcriptional regulator, IclR family |
Protein accession | YP_003200737 |
Protein GI | 258651581 |
COG category | [K] Transcription |
COG ID | [COG1414] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 0.453635 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.806138 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTCAGG CGACGGGAAC CGCGACCGGT GGCGCGCAAA CGCTCGCCCG GGGGCTGTCC GCGCTCAAGG CCGTAGTCGC CGCCCCCGAC GGGCTGTCCG CCCAGGACGT CGGCGACCTG CTCGGCGTGC ACCGGACCAT CGCCTACCGG CTGCTCACCA CGCTGGTCGA CGCCGGGCTG GTCAGCCGCG GCCAGGACGG CCGGTTCCGC GGAGCGGTCG GCCTGCTGCA GTTGACCGCG GGCGCGTTCC ACACCCTGCG GGCGACTGCG GTGCCGATCC TGCGCCGGTT GGCCAATGAC GTCGGTTCCA CCGTGTCCCT GCTGGTGGTG GAGAACGACG AGGCGGTCGC GTTGGCCGTC GTGGAATCCG AGACCTCCCG GTACCGGATC GTGTTCGCCG AGGGCAGCAC CCATCCGTTG GACCGTGGCG CGGCCGGGCA CGCGCTGTCG TCGATCCGGC CGGCGACAGC CCAGGACAGC GACCGGGTGC GCAAGGCCCG GGCCGACGGG TACGCGACGT CGTTCGCCGA GGTCGAACCG GGCGCCTACG GTCTGGCCGT GCCGGTCCCC TCTCCGGACC CCGCCGTCGC CGCCTGCATC AACCTGATCA CCTACCGGCC GGAACTGATC GAGCAGGCCC GGCCCGCCGT GATGGCGGCC GCCGCCGAAC TGGGCCGGGC CCTGGTCGCG GCGCCGGACT GA
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Protein sequence | MAQATGTATG GAQTLARGLS ALKAVVAAPD GLSAQDVGDL LGVHRTIAYR LLTTLVDAGL VSRGQDGRFR GAVGLLQLTA GAFHTLRATA VPILRRLAND VGSTVSLLVV ENDEAVALAV VESETSRYRI VFAEGSTHPL DRGAAGHALS SIRPATAQDS DRVRKARADG YATSFAEVEP GAYGLAVPVP SPDPAVAACI NLITYRPELI EQARPAVMAA AAELGRALVA APD
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