Gene Namu_1345 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNamu_1345 
Symbol 
ID8446941 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNakamurella multipartita DSM 44233 
KingdomBacteria 
Replicon accessionNC_013235 
Strand
Start bp1484578 
End bp1485279 
Gene Length702 bp 
Protein Length233 aa 
Translation table11 
GC content74% 
IMG OID645040478 
Producttranscriptional regulator, IclR family 
Protein accessionYP_003200737 
Protein GI258651581 
COG category[K] Transcription 
COG ID[COG1414] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value0.453635 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.806138 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTCAGG CGACGGGAAC CGCGACCGGT GGCGCGCAAA CGCTCGCCCG GGGGCTGTCC 
GCGCTCAAGG CCGTAGTCGC CGCCCCCGAC GGGCTGTCCG CCCAGGACGT CGGCGACCTG
CTCGGCGTGC ACCGGACCAT CGCCTACCGG CTGCTCACCA CGCTGGTCGA CGCCGGGCTG
GTCAGCCGCG GCCAGGACGG CCGGTTCCGC GGAGCGGTCG GCCTGCTGCA GTTGACCGCG
GGCGCGTTCC ACACCCTGCG GGCGACTGCG GTGCCGATCC TGCGCCGGTT GGCCAATGAC
GTCGGTTCCA CCGTGTCCCT GCTGGTGGTG GAGAACGACG AGGCGGTCGC GTTGGCCGTC
GTGGAATCCG AGACCTCCCG GTACCGGATC GTGTTCGCCG AGGGCAGCAC CCATCCGTTG
GACCGTGGCG CGGCCGGGCA CGCGCTGTCG TCGATCCGGC CGGCGACAGC CCAGGACAGC
GACCGGGTGC GCAAGGCCCG GGCCGACGGG TACGCGACGT CGTTCGCCGA GGTCGAACCG
GGCGCCTACG GTCTGGCCGT GCCGGTCCCC TCTCCGGACC CCGCCGTCGC CGCCTGCATC
AACCTGATCA CCTACCGGCC GGAACTGATC GAGCAGGCCC GGCCCGCCGT GATGGCGGCC
GCCGCCGAAC TGGGCCGGGC CCTGGTCGCG GCGCCGGACT GA
 
Protein sequence
MAQATGTATG GAQTLARGLS ALKAVVAAPD GLSAQDVGDL LGVHRTIAYR LLTTLVDAGL 
VSRGQDGRFR GAVGLLQLTA GAFHTLRATA VPILRRLAND VGSTVSLLVV ENDEAVALAV
VESETSRYRI VFAEGSTHPL DRGAAGHALS SIRPATAQDS DRVRKARADG YATSFAEVEP
GAYGLAVPVP SPDPAVAACI NLITYRPELI EQARPAVMAA AAELGRALVA APD