Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Namu_1319 |
Symbol | |
ID | 8446915 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nakamurella multipartita DSM 44233 |
Kingdom | Bacteria |
Replicon accession | NC_013235 |
Strand | - |
Start bp | 1448286 |
End bp | 1449557 |
Gene Length | 1272 bp |
Protein Length | 423 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 645040452 |
Product | transposase IS116/IS110/IS902 family protein |
Protein accession | YP_003200711 |
Protein GI | 258651555 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3547] Transposase and inactivated derivatives |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 0.622627 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.467675 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCCGGTGA TCGACGACGA CGAGATCGCC TACGGCCGGG TCGCGGGGAT GGACATCTCC AAGCGCGATG TCAAGGTCGC GGTCCGGCTG ATCGAGAACG GCCGGGTCAA ACGACTCAAG GTCCGCACCT TCGCCACGAC GACACCATCG CTGCTGCGGC TACGGGACTG GCTGACCGAA CTGGACATCG AGCTGGTCGC GATGGAATCG ACCGGGGTGT ACTGGAAACC ATTGTTCCTG GTGCTGGAAG ACCAGTTCAG ATGCTGGCTA CTCAACCCGC GGGACGTCAA ACGGGTACCG GGCAACAAGA CCGACGTCAA GGACGCCGAA TGGATCGCTC GGATGGCTCA GCTCGGGCTC GTCACACCCT CGTTCGTGCC GGACATCCCG GTGCGGGAGC TGCGGGAGTT GACCCGGTAC CGCAGCAACG TGGTCCGCGA CCGGACCCGC GCCGTGCAAC GGCTGCAGGA TCTGCTCGAA TCCGCCGGGA TCAAGCTGTC CAGCACGGTC AGCGACATCA CCGGCAAATC GGCCACCGCG ATGCTGCACG CGATGATCAA CGACCCGGCC GGGGCGATGA GTGATCCCCG CCAGGTCGCG GACCTGGCGC TGGTCCGGAT GCGCAGCAAG CTCCCGGAAC TGACCGAGGC CCTGACCGGA CACTTCACCG ACCACCACGC GCGACTGGCC GCCACGATGA TGCGACAGAT CAACGACCTC GACACGCTCC TCACGGACCT GGACCAACAG ATCGACCAGG AGATCGCCCC TTTCGCCCGA GCGGTTGACC ACCTCGAGAC GATCCCGGGA GTCAGCCGCC GCGCCGCGAT GATCATCGTC TCCGAGATCG GGATCGACAT GAGCCGGTTC ACCGGGACCG ACCGGCTGGC CTCGTGGGCC GGGCTCAGCC CCGGGAACAA CGAATCAGCC GGACGACACC TCTCGACCCG GACCCGCAAG GGCAACCGGT CACTACGCGC AGTGCTGTTC CAGTGCGCCA AGGCCGCCGC CCGCACCCAC AGCACGTACC TGGCCGCGAA GTACGCCGAT CTGTGTACCC GGATGAAACC AACCAAAGCC CTGGTCGCGA TCTCCAGGAT CATCCTGGAG ACCTGTCACC ACCTGATCCG CAAAGACACC GACTACCACG ACCTCGGACC CACCTACCTG AACGAATACC GCCGCCGCGA CCTGGACAAG AACCGGATCC GCCGCGCCCG CACCATCCTC GAAACCAACG GCTACACCGT CACCCACAAC GACGCCGCAT GA
|
Protein sequence | MPVIDDDEIA YGRVAGMDIS KRDVKVAVRL IENGRVKRLK VRTFATTTPS LLRLRDWLTE LDIELVAMES TGVYWKPLFL VLEDQFRCWL LNPRDVKRVP GNKTDVKDAE WIARMAQLGL VTPSFVPDIP VRELRELTRY RSNVVRDRTR AVQRLQDLLE SAGIKLSSTV SDITGKSATA MLHAMINDPA GAMSDPRQVA DLALVRMRSK LPELTEALTG HFTDHHARLA ATMMRQINDL DTLLTDLDQQ IDQEIAPFAR AVDHLETIPG VSRRAAMIIV SEIGIDMSRF TGTDRLASWA GLSPGNNESA GRHLSTRTRK GNRSLRAVLF QCAKAAARTH STYLAAKYAD LCTRMKPTKA LVAISRIILE TCHHLIRKDT DYHDLGPTYL NEYRRRDLDK NRIRRARTIL ETNGYTVTHN DAA
|
| |