Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Namu_1302 |
Symbol | |
ID | 8446898 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nakamurella multipartita DSM 44233 |
Kingdom | Bacteria |
Replicon accession | NC_013235 |
Strand | + |
Start bp | 1428982 |
End bp | 1430697 |
Gene Length | 1716 bp |
Protein Length | 571 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 645040435 |
Product | malate dehydrogenase |
Protein accession | YP_003200694 |
Protein GI | 258651538 |
COG category | [C] Energy production and conversion |
COG ID | [COG0281] Malic enzyme |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.0218032 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.203099 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGCTCG CCCCGTATGA GCTGGTCCAT CAACCGCGGG AGGTGGTGGC GCGGGTGCGT GCTCGTGGTC GCCTGGTGTT GTCCTCGCCG ACGATTAATC GGGGGACGGC GTTCACGTTG GCGCAGCGGG AGCAGTTGGA GTTGACGGGG TTGTTGCCGA CGGGGGTGTC GACGTTGGAG GGTCAGGTTC GGCGGGTGTG GGCGCAGTAT TTGCAGCAGC CGTCGGATTT GGCGAAGTGG GTGTATTTGG CGAATTTGCG GGATCGTAAC GAGGTGTTGT TCTACCGGTT GTTGTCGGAG CATTTGCCGG AGATGTTGCC GGTGGTGTAT ACGCCGACGG TGGGGACGGC GATCGAGCGG TTCAGTCATG AGTTCCGGCG TAGTCGGGGC GTGTTTTTGT CGGTGGATCA TCCGGATCAG GTGGAGACCG CGTTGCGGAA CACTGGTTTG GGTCCGGATG ATGTTGATTT GTTGGTCGCG ACGGATTCCG AGGGGATTTT GGGGATCGGT GATCAGGGGA TCGGTGGTAT TGAGATCTCG ATCGGGAAGT TGTCGGTGTA TACGGCGGCG GCGGGGATTC ATCCGCGGCG GGTGTTGCCG GTGGTGTTGG ACATGGGTAC CGATAATTTG CGGTTGTTGA ATGATTCGAT GTATTTGGGT GAGCGGCATG CGCGGGTGCG GGATCATCGG TATGACGAGT TGATCGATGC GTATGTGACG GCGTGTAACA AGTTGTTCCC GAACGCGATG TTGCATTGGG AGGATTTCGG GACGGAGAAC GCCCGCCGGA TTTTGAACAA GTATTCGGGG GTGTGTTGCA CGTTCAATGA TGATATGCAG GGCACGGCGG CGGTGGTGTT GGCGGCGGTG TTCTCGGCGG TGCGGGCGGC GGGGTCGCGG TTGGCTGATC AGCGGATCGT GATCCATGGG GCGGGTACGG CCGGGTTGGG GATCGCGGAC ATGTTGCGGG ATCAGATGAT CCGGGAGGGG TTGTCGCCGG CGGAGGCGAC GGGCCGGTTC TATGCGTTGG CCAAGCAGGG GTTGTTGGTT GATGACGATC CGTCGTTGTT GGATTTCCAG GTGCCGTATG CGCGCTCGCG GGCCGAGGTG GCGGGGTGGC CGGCGGGTGC GGGTGGGGTC GGGTTGGCCA CGGTGGTGTC GCGGGCGCGG CCGACGATTT TGATCGGGAC GTCGACGCAG GCGGGGGCGT TCACGGAGTC GATCGTGCGG GAGATGGCTT CGTTCAATGC GCGGCCGATC ATTTTGCCGT TGTCGAATCC GACGAGTAAG GCCGAGGCGT TGCCGCATGA TCTGATCCAT TGGACGGACG GGAAGGTGTT GACCGCGACG GGTAGCCCGT TCGAGCCGGT GCATTACAAG GGGGTGGCGT ATCAGATTGC GCAGTCGAAC AATGCGTTGG TGTTTCCCGG GTTGGGGTTG GGGGTGGCGG TGACGAAGGC GTCGCGGATC AGTGAGGGGA TGATCGCGGC GGCGGCGGAT GCGGTGGCGG CGATGTCGGA TGCGCGCACG CCGGGGGCGA GTTTGTTGCC GCCGATGACG GTGTTGCGGA CGGCGTCGGC GGCGGTGGCG ATCGCGGTGG CGAAGGCGGC CGATGCCGAG GGGTTGGCGC GGGTGGAGCT GAGTAATCCG GTGCAGCAGG TGTATGACGC GATGTGGCAG CCGGAGTATC CGCGGATCGA GCCGATCGAG GCCTGA
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Protein sequence | MALAPYELVH QPREVVARVR ARGRLVLSSP TINRGTAFTL AQREQLELTG LLPTGVSTLE GQVRRVWAQY LQQPSDLAKW VYLANLRDRN EVLFYRLLSE HLPEMLPVVY TPTVGTAIER FSHEFRRSRG VFLSVDHPDQ VETALRNTGL GPDDVDLLVA TDSEGILGIG DQGIGGIEIS IGKLSVYTAA AGIHPRRVLP VVLDMGTDNL RLLNDSMYLG ERHARVRDHR YDELIDAYVT ACNKLFPNAM LHWEDFGTEN ARRILNKYSG VCCTFNDDMQ GTAAVVLAAV FSAVRAAGSR LADQRIVIHG AGTAGLGIAD MLRDQMIREG LSPAEATGRF YALAKQGLLV DDDPSLLDFQ VPYARSRAEV AGWPAGAGGV GLATVVSRAR PTILIGTSTQ AGAFTESIVR EMASFNARPI ILPLSNPTSK AEALPHDLIH WTDGKVLTAT GSPFEPVHYK GVAYQIAQSN NALVFPGLGL GVAVTKASRI SEGMIAAAAD AVAAMSDART PGASLLPPMT VLRTASAAVA IAVAKAADAE GLARVELSNP VQQVYDAMWQ PEYPRIEPIE A
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