Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Namu_1245 |
Symbol | |
ID | 8446841 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nakamurella multipartita DSM 44233 |
Kingdom | Bacteria |
Replicon accession | NC_013235 |
Strand | + |
Start bp | 1365872 |
End bp | 1367176 |
Gene Length | 1305 bp |
Protein Length | 434 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 645040379 |
Product | transposase IS204/IS1001/IS1096/IS1165 family protein |
Protein accession | YP_003200638 |
Protein GI | 258651482 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3464] Transposase and inactivated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.139986 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.210656 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGCGATG ACGTTACCGG TGTGTTCGTG CTGCCCGGAT TCCGGGTGGT GTCCAGCGAC GTGCTCGACG ACGAATGGCA CCTGCTTGTG GAAACGCGGC GGGAGCCGAC GGGCTGCCCG ACCTGCGGCG CGGTCGCCCG AGTCAAGGAC CGGCGCACGG TGACCGTGCG GGACCTGCCG GCCGGCGGTG TGCCGGTCGT TCTCCGTTGG TGCAAGCGGA TTTTCGAGTG TCGATACGGG TTGTGCGAGA AGAAGACCTG GACCGAGCAA CACGACGCGA TCGCCCCGCG TGTGGTGCTC ACCGACCGTG CGCAGCAGTG GGCGTTCGAG CAGGTCGGCC ACCACGACCG GGCCGTGTCC CGGGTCGCGG CCCAACTCGG CGTGTCCTGG CACACGATCA TGACCCAGGT CGTTGACCGC GGCACCCCGC TGGTCGAGGA CCCGGACCGG CTGGCCGGGG TGAGCGCGGT CGGGGTCGAC GAGACCTCGT TCCTGCGGGC CACCGGCACC CGGCACACCC AGTACGCCAC CGGCGTCGCC GACCTGACCC CGGGCCGCCC ACCGCGGCTG CTGGACGTCG TACCGGGCCG CTCCGGCCGA GTCCTGGGCG ACTGGCTGAC CGACCGCGAC GAGGCCTGGC GGTCCGCCGT TCTGACCGCG TCGCTGGACC CGTTCCGCGG TTATGCCACC GCGCTCTCGG CGCATCTACC TGCGACGACG CGCGTGCTGG ACGCCTTCCA CATCGTCAAG ATCGTGCTTC TCGCGGTCGA CCAGGTCCGC CGCCGCGTGC AGCAGGACAC CACCGGGCAC CGCGGCCGGG CCGGCGACCC GCTGTACCGG GTACGACGGA TCCTGCGGCG CCGCTACGAC CGGCTCACCG ACCGGCAACT GGTCCGACTG CGGGCCGCAC TGACCGACGC GGACACGCAC GAGGAGATCA CCGCCGCCTG GCTCGTCGCG CAGAACGTCA TGCAGGCCTA CGCCAACCCC GACCGGGCCG CCGGACGCGC CGCGGCCGAG CAGGTCATCA CCCTGGCCAA GACCTGCCCG GTTCCCGAGA TCGCCCGCTT CGGGCGCACT CTGGTCGCGT GGCGGACCGA GTACCTGGCC CGGTTCGACA ACCCCGCCCT ATCCAACGGA CCCACCGAGA ACCTCAACCT GAAGATCAAG AACACCAAAC GGATCGCCCG CGGCTACCGA TCGTTCGCCA ACTACCGTCT GCGACTACTT CTCAACCACG GCCTCATCAG GCAAGATCAA CAACCGGCAC GGATCCGACC ACACCGACCC AGGTTGATTG CGTAG
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Protein sequence | MSDDVTGVFV LPGFRVVSSD VLDDEWHLLV ETRREPTGCP TCGAVARVKD RRTVTVRDLP AGGVPVVLRW CKRIFECRYG LCEKKTWTEQ HDAIAPRVVL TDRAQQWAFE QVGHHDRAVS RVAAQLGVSW HTIMTQVVDR GTPLVEDPDR LAGVSAVGVD ETSFLRATGT RHTQYATGVA DLTPGRPPRL LDVVPGRSGR VLGDWLTDRD EAWRSAVLTA SLDPFRGYAT ALSAHLPATT RVLDAFHIVK IVLLAVDQVR RRVQQDTTGH RGRAGDPLYR VRRILRRRYD RLTDRQLVRL RAALTDADTH EEITAAWLVA QNVMQAYANP DRAAGRAAAE QVITLAKTCP VPEIARFGRT LVAWRTEYLA RFDNPALSNG PTENLNLKIK NTKRIARGYR SFANYRLRLL LNHGLIRQDQ QPARIRPHRP RLIA
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