Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Namu_1215 |
Symbol | |
ID | 8446811 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nakamurella multipartita DSM 44233 |
Kingdom | Bacteria |
Replicon accession | NC_013235 |
Strand | + |
Start bp | 1336864 |
End bp | 1338045 |
Gene Length | 1182 bp |
Protein Length | 393 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 645040351 |
Product | integrase family protein |
Protein accession | YP_003200610 |
Protein GI | 258651454 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG4974] Site-specific recombinase XerD |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.0266422 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGCAGA GCGTGATGGC CCGACCCGAC GGCGGGCCTC GCACGTGGAC GGTGATCGAT CAGGGATACC GGACGGTCGG ACCGGTCGAG GAGTGGCTGG AGGCCCACCG GCATCTTTGG TCGCCGAACA CGGTCCGCGG GTACGCGACC GCGCTGAGCC AGTGGTGGAC GTTCCTTGAA CAGCGGGCCG AGTCCGGGCG GTGGAACGAG ATCGGCGTGC CGACGGTGTC GGCGTTCGTG TCCTGGATGC GCAACGGGCG CCGGGTCGAG CGTTCCCTGG TGCCGGAGGA CGGGCCGTCG CCGGAGACGA TGCAGGCGCG GCTGGCCGCG GTCATCTCCT TCTACACGTG GCACGAAGCC GTGTCCGGCG TTCCGGTGGC CGGCCGGTTG ATGCGTGGAG CGCCGCGGCG GGCAGTGGCC CGGGGGCTGC TGTCCCATCT GGATGCCCGC TCGGGGCCCG CTCCGACGTC GCTGGTCCGG GTGCGCCGCA GCCGGCGGCA TCGTCCGCCG TTGCTGATGC CCCAGCAGAT CCAGGCGATC CTGGATGGCT GCGCCACCTA CGATCCAGAC ACCGGTGAAT GGGTCGGAAA CCTGCGTGAC CGGCTGCTTT TCGCCGTTCT TGCGGAGAGC GGCATGCGGA TCGGCGAGGC GTTGGGTTTG CGGATCAGCG ACTTCGTGAT GGGTCGCGGC GGCACCCCGT TCATCGAGAT CGTGCCTCGC GCGGACAACA CCAATGGGGC GCGGGTGAAG ATGATGCGTC CCCGCCGGGT CTACGTCGGC GCCGATCTCG AGCGGCTGTT CGCCGACTAC CTGACCCTCC TGGCCTGCAC AGCAGCCGAT ATGGGCATCG CGGTGGCGGC GGACTCGCCG CTGCTGGTCA ACCTGCAACG GCCGCCGCTG CTGGCTGCGC TGCACGAGGG CACCGTCCGC GACAAGACGG CCGCGCTGCG GAAGAAGGGG ATCGGCCCGC CCGGGTGGAC CCCGCACTGG TTCAGGCATA GCCACGCGAC CGCGTTGCTG CTGGCCGGCA CGGCGGAGTG GGTGGTGTCC CGTCGGCTGG GGCACGCCCA CGTCCAGACC ACGCTGGACC TCTACGGCTG GGTCCGCGAG GACGAGGCGC TGCGGGCGGC GGCGAACTGG ACGTCGTACG CGTCCAATTG GCGGGTGACC GATGCGCCGT GA
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Protein sequence | MAQSVMARPD GGPRTWTVID QGYRTVGPVE EWLEAHRHLW SPNTVRGYAT ALSQWWTFLE QRAESGRWNE IGVPTVSAFV SWMRNGRRVE RSLVPEDGPS PETMQARLAA VISFYTWHEA VSGVPVAGRL MRGAPRRAVA RGLLSHLDAR SGPAPTSLVR VRRSRRHRPP LLMPQQIQAI LDGCATYDPD TGEWVGNLRD RLLFAVLAES GMRIGEALGL RISDFVMGRG GTPFIEIVPR ADNTNGARVK MMRPRRVYVG ADLERLFADY LTLLACTAAD MGIAVAADSP LLVNLQRPPL LAALHEGTVR DKTAALRKKG IGPPGWTPHW FRHSHATALL LAGTAEWVVS RRLGHAHVQT TLDLYGWVRE DEALRAAANW TSYASNWRVT DAP
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