Gene Namu_1187 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNamu_1187 
Symbol 
ID8446783 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNakamurella multipartita DSM 44233 
KingdomBacteria 
Replicon accessionNC_013235 
Strand
Start bp1304993 
End bp1306861 
Gene Length1869 bp 
Protein Length622 aa 
Translation table11 
GC content70% 
IMG OID645040324 
Productglucosamine--fructose-6-phosphate aminotransferase 
Protein accessionYP_003200583 
Protein GI258651427 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0449] Glucosamine 6-phosphate synthetase, contains amidotransferase and phosphosugar isomerase domains 
TIGRFAM ID[TIGR01135] glucosamine--fructose-6-phosphate aminotransferase (isomerizing) 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.430985 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGCGGAA TCGTCGGCTA CACCGGTCCC CGTCAGGCGC TGCCGCTCGT CCTGGAGGGA 
CTGCGCCGGC TCGAGTACCG GGGCTATGAC TCCGCGGGCG TCGTGGTGCT GGACCGGGAC
GGGGCGGCCC CCCAGCTGAA CCTGGCCAAG AAGGCCGGGC GGATCGGCAA CCTCGAGGCC
TTCATCGACA CCGGGGCGGT GGCCCTGGCC GGCACGACCG GCATGGGACA CACCCGGTGG
GCCACCCACG GCGGCCCGAC CGACCGTAAC GCGCACCCGC ACACCGACAT GCACCGCCGG
GTCGCGGTCA TCCACAACGG CATCATCGAG AACTTCGTGC CGCTGCGGGC CGAGCTGGAG
GCCGCCGGCA TCGAGTTCAG CAGCGACACC GACACCGAGG TGGTCGCGCA CCTGCTGTCC
CGGGTGATGG CCGACGGCCC GACCGCCGGT GACCTGCCGG CCAGCATGGC CGCCGTCTGC
CGCGGCCTGG AGGGTGCGTT CACCCTCGTC GCGATGCACC TGGACGCTCC GGAGACGCTG
GTCGCGGCCC GGCGCAACTC GCCGCTGGTG GTCGGCATCG GCGAGGACGA GATGTTCGTG
GCCAGCGACG TCGCCGCGTT CATCGCGCAC ACCCGGAACG CCGTCGAGCT CGGCCAGGAC
CAGCTCGTCG TGATCAACCC GGACGGCTAC GAGGTCACCT CCTTCACCGG TGGCGAGCCG
GACTTCCGCG AGTTCCACGT CGATTGGGAC CTCTCGGCCG CGGAAAAGGG CGGCTTCGAG
TTCTTCATGG ACAAGGAGAT CGAGGAGCAG CCCGCGGCCG TCGCGCAGAC CCTGCTGGGC
CACTTCGACG GCTCCGGGAT CGTGCTGGAC GAACTGCGCC TGTCCGAGGA CGACCTGCGC
ACGATCGACA AGGTGTTCGT GGTCGCCTGC GGCACCGCCT ACCACTCCGG GCTGGTCGCC
AAGTACGCCA TCGAGCACTG GTGCCGGATC CCGGTCGAGG TCGAGGTGGC CAGCGAGTTC
CGCTACCGCG ACCCCGTGCT CAACCGGGAC ACCCTGGTGG TCGCGGTCAG CCAGTCGGGC
GAGACCGCCG ACACGCTGGA GGCCCTGCGG CACGCCCGCC GGCAGAAGGC CCGGGTGCTG
GCCGTCTGCA ACACCAACGG CTCGCAGATC CCGCGGGAGT CCGACGCCGT CGTCTACATC
CACGCCGGGC CGGAGATCGG CGTCGCCTCG ACCAAGGCGT TCCTGGGCAT GCTGACCGCG
AACTACCTGG TCGGGCTGGC CCTGGCGCAG GCCCGCGGCA CCAAGTACCG AGACGAGATC
GCCCGGGAAT ACGAGGAACT GACCAAGATC CCGGACGCCA TCGCCACCAC GCTGACCCTG
ATGGACCCGG TCCGCAAGCT CGCCCAGGAG ATCTCCACGG CCAAGGCGAT CCTGTTCCTG
GGCCGGCACG TGGGCTACCC GGTCGCCCTC GAAGGCGCGC TCAAGCTCAA GGAACTGGCC
TACATGCACG CCGAGGGCTT CGCCGCCGGC GAGCTCAAGC ACGGGCCGAT CGCGCTGATC
GAGGAGGGGC TGCCGGTCGT CATCGTCACC CCGTCGCCGG TCACCGACCC GCTGCTGCAC
TCCAAGCTGC TGTCCAACAT CCGGGAGATC CAGGCCCGCG GCGCCCGCAC CATCGTCATC
GCCGAGGAGG GGGATGAGAC GGTCGCCCCG TTCGCCGACT TCCTGATCGA GCTGCCCAAG
GTGCCCAAGC TGTACCAGCC GCTGATCACC ACCGTGCCGC TGCAGATCCT GGCCGCCGAG
ATCGCCCGGG CCAAGGGCTT CGACCTGGAC AAGCCCCGGA ACCTGGCCAA GTCGGTCACC
GTCGAGTAG
 
Protein sequence
MCGIVGYTGP RQALPLVLEG LRRLEYRGYD SAGVVVLDRD GAAPQLNLAK KAGRIGNLEA 
FIDTGAVALA GTTGMGHTRW ATHGGPTDRN AHPHTDMHRR VAVIHNGIIE NFVPLRAELE
AAGIEFSSDT DTEVVAHLLS RVMADGPTAG DLPASMAAVC RGLEGAFTLV AMHLDAPETL
VAARRNSPLV VGIGEDEMFV ASDVAAFIAH TRNAVELGQD QLVVINPDGY EVTSFTGGEP
DFREFHVDWD LSAAEKGGFE FFMDKEIEEQ PAAVAQTLLG HFDGSGIVLD ELRLSEDDLR
TIDKVFVVAC GTAYHSGLVA KYAIEHWCRI PVEVEVASEF RYRDPVLNRD TLVVAVSQSG
ETADTLEALR HARRQKARVL AVCNTNGSQI PRESDAVVYI HAGPEIGVAS TKAFLGMLTA
NYLVGLALAQ ARGTKYRDEI AREYEELTKI PDAIATTLTL MDPVRKLAQE ISTAKAILFL
GRHVGYPVAL EGALKLKELA YMHAEGFAAG ELKHGPIALI EEGLPVVIVT PSPVTDPLLH
SKLLSNIREI QARGARTIVI AEEGDETVAP FADFLIELPK VPKLYQPLIT TVPLQILAAE
IARAKGFDLD KPRNLAKSVT VE